RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA807347", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Joergenseniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Joergenseniibacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA807347 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27663442 27663442 PRJNA807347_P_NODE_1344_length_710_cov_2.155416_g1249_i0 PRJNA807347 1344 710 2.155416 15.3034536 Pseudomonadati 3379134 Bacteria Bacteria 357 2.29e-121   NR PIT91713.1 1974593 g1249 i0 79.6 19.4957746478873 211 43 89.2 0 78 710 40 250 PIT91713.1 MAG: site-specific DNA-methyltransferase [Candidatus Jorgensenbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_54_38] diamond 13842 359 0.994428969359331 Bacteria Bacteria candidate phyla   Candidatus Joergenseniibacteriota         Candidatus Jorgensenbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_54_38

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;