RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA806354" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

tax_clade 1

bioproject 1

  • PRJNA806354 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29643247 29643247 PRJNA806354_P_NODE_36870_length_248_cov_0.880000_g36761_i0 PRJNA806354 36870 248 0.88 2.1824 Nitrososphaerota archaeon 2026795 Archaea Archaea 58.9 7.69e-8   NR MDA4131702.1 2026795 g36761 i0 42.4 0.713709677419355 59 34 71.4 0 4 180 230 288 MDA4131702.1 hypothetical protein [Nitrososphaerota archaeon] diamond 177 58.9 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
31919126 31919126 PRJNA806354_P_NODE_41157_length_241_cov_0.916667_g41048_i0 PRJNA806354 41157 241 0.916667 2.20916747 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 52.8 2.26e-6   NR HNR81745.1 2026773 g41048 i0 56.5 0.572614107883817 46 19 57.3 1 141 4 4 48 HNR81745.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 138 52.8 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;