RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA806354", tax_kingdom = "Metazoa" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA806354 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16525186 16525186 PRJNA806354_P_NODE_29353_length_274_cov_1.199005_g29244_i0 PRJNA806354 29353 274 1.199005 3.2852737 Metazoa 33208 Mollusca Mollusca 285 2.28e-72   NTclustered gi|1928112766|gb|MT947789.1| 6523 g29244 i0 100 54.1240875912409 154 0 56 0 1 154 979 826 Lymnaea stagnalis isolate Lsta_466444 hypothetical protein mRNA, complete cds blastn 14830 285 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lymnaeidae Lymnaea Lymnaea stagnalis
21208183 21208183 PRJNA806354_P_NODE_11797_length_412_cov_2.044248_g11688_i0 PRJNA806354 11797 412 2.044248 8.42230176 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.04   NTclustered gi|2912999747|dbj|AP039606.1| 145626 g11688 i0 100 0.0679611650485437 28 0 7 0 63 90 2800657 2800684 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 25, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;