RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA806354", tax_clade = "PVC group" and tax_phylum = "Planctomycetota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 4 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 4 ✖

bioproject 1

  • PRJNA806354 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12285480 12285480 PRJNA806354_P_NODE_38390_length_245_cov_2.470930_g38281_i0 PRJNA806354 38390 245 2.47093 6.0537785 Phycisphaeraceae bacterium 2026777 Bacteria Bacteria 318 1.9699999999999998e-82   NTclustered gi|2076441902|gb|CP075368.1| 2026777 g38281 i0 92.07 109.028571428571 227 16 93 2 1 227 2582744 2582968 MAG: Phycisphaeraceae bacterium isolate ACE_PLA2 chromosome blastn 26712 318 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales Phycisphaeraceae   Phycisphaeraceae bacterium
13559716 13559716 PRJNA806354_P_NODE_9271_length_460_cov_3.713178_g9162_i0 PRJNA806354 9271 460 3.713178 17.0806188 Phycisphaerales bacterium 2052180 Bacteria Bacteria 649 0   NTclustered gi|1958061316|gb|CP064987.1| 2052180 g9162 i0 92.157 246.408695652174 459 36 99 0 1 459 2192048 2192506 Phycisphaerales bacterium isolate Fred_18-Q3-R57-64_MAXAC.330_cln chromosome, complete genome blastn 113348 649 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
23758753 23758753 PRJNA806354_P_NODE_6519_length_541_cov_4.720085_g6410_i0 PRJNA806354 6519 541 4.720085 25.53565985 Phycisphaerales bacterium 2052180 Bacteria Bacteria 706 0   NTclustered gi|1958061316|gb|CP064987.1| 2052180 g6410 i0 90.538 95.1700554528651 539 43 99 8 3 537 2190679 2190145 Phycisphaerales bacterium isolate Fred_18-Q3-R57-64_MAXAC.330_cln chromosome, complete genome blastn 51487 706 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
27243785 27243785 PRJNA806354_P_NODE_28923_length_275_cov_2.920792_g28814_i0 PRJNA806354 28923 275 2.920792 8.032178 Planctomycetota bacterium 2026780 Bacteria Bacteria 44.7 0.0104   NR MEM7518636.1 2026780 g28814 i0 58.3 0.392727272727273 36 15 39.3 0 27 134 4 39 MEM7518636.1 DUF1601 domain-containing protein [Planctomycetota bacterium] diamond 108 44.7 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;