contig_metadata
10 rows where bioproject = "PRJNA806354" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3357031 | 3357031 | PRJNA806354_P_NODE_4103_length_669_cov_2.927852_g3996_i0 | PRJNA806354 | 4103 | 669 | 2.927852 | 19.58732988 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 1098 | 0 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g3996 | i0 | 96.263 | 262.866965620329 | 669 | 25 | 100 | 0 | 1 | 669 | 861 | 193 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 175858 | 1098 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 11009956 | 11009956 | PRJNA806354_P_NODE_41549_length_239_cov_5.548193_g41440_i0 | PRJNA806354 | 41549 | 239 | 5.548193 | 13.26018127 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 425 | 1.1e-114 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g41440 | i0 | 98.745 | 267.97489539749 | 239 | 3 | 100 | 0 | 1 | 239 | 2190 | 2428 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 64046 | 425 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 12285480 | 12285480 | PRJNA806354_P_NODE_38390_length_245_cov_2.470930_g38281_i0 | PRJNA806354 | 38390 | 245 | 2.47093 | 6.0537785 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 318 | 1.9699999999999998e-82 | NTclustered | gi|2076441902|gb|CP075368.1| | 2026777 | g38281 | i0 | 92.07 | 109.028571428571 | 227 | 16 | 93 | 2 | 1 | 227 | 2582744 | 2582968 | MAG: Phycisphaeraceae bacterium isolate ACE_PLA2 chromosome | blastn | 26712 | 318 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 13559716 | 13559716 | PRJNA806354_P_NODE_9271_length_460_cov_3.713178_g9162_i0 | PRJNA806354 | 9271 | 460 | 3.713178 | 17.0806188 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 649 | 0 | NTclustered | gi|1958061316|gb|CP064987.1| | 2052180 | g9162 | i0 | 92.157 | 246.408695652174 | 459 | 36 | 99 | 0 | 1 | 459 | 2192048 | 2192506 | Phycisphaerales bacterium isolate Fred_18-Q3-R57-64_MAXAC.330_cln chromosome, complete genome | blastn | 113348 | 649 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 16108548 | 16108548 | PRJNA806354_P_NODE_40593_length_242_cov_0.911243_g40484_i0 | PRJNA806354 | 40593 | 242 | 0.911243 | 2.20520806 | root | 1 | Root_unresolved | Root_unresolved | 130 | 5.06e-33 | NR | WP_007279800.1 | 256847 | g40484 | i0 | 75.6 | 417.520661157025 | 78 | 19 | 96.7 | 0 | 7 | 240 | 631 | 708 | WP_007279800.1 ATP-dependent chaperone ClpB [Lentisphaera araneosa] | diamond | 101040 | 130 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Lentisphaerales | Lentisphaeraceae | Lentisphaera | Lentisphaera araneosa | |
| 22483011 | 22483011 | PRJNA806354_P_NODE_39578_length_243_cov_7.982353_g39469_i0 | PRJNA806354 | 39578 | 243 | 7.982353 | 19.39711779 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 449 | 6.65e-122 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g39469 | i0 | 100 | 262.777777777778 | 243 | 0 | 100 | 0 | 1 | 243 | 2384 | 2626 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 63855 | 449 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 23758753 | 23758753 | PRJNA806354_P_NODE_6519_length_541_cov_4.720085_g6410_i0 | PRJNA806354 | 6519 | 541 | 4.720085 | 25.53565985 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 706 | 0 | NTclustered | gi|1958061316|gb|CP064987.1| | 2052180 | g6410 | i0 | 90.538 | 95.1700554528651 | 539 | 43 | 99 | 8 | 3 | 537 | 2190679 | 2190145 | Phycisphaerales bacterium isolate Fred_18-Q3-R57-64_MAXAC.330_cln chromosome, complete genome | blastn | 51487 | 706 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 27243785 | 27243785 | PRJNA806354_P_NODE_28923_length_275_cov_2.920792_g28814_i0 | PRJNA806354 | 28923 | 275 | 2.920792 | 8.032178 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 44.7 | 0.0104 | NR | MEM7518636.1 | 2026780 | g28814 | i0 | 58.3 | 0.392727272727273 | 36 | 15 | 39.3 | 0 | 27 | 134 | 4 | 39 | MEM7518636.1 DUF1601 domain-containing protein [Planctomycetota bacterium] | diamond | 108 | 44.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 29201674 | 29201674 | PRJNA806354_P_NODE_41349_length_241_cov_0.916667_g41240_i0 | PRJNA806354 | 41349 | 241 | 0.916667 | 2.20916747 | Omnitrophica bacterium RIFCSPHIGHO2_ | 2035772 | Bacteria | Bacteria | 74.7 | 3.64e-15 | NR | OGW83799.1 | 1801823 | g41240 | i0 | 57.7 | 0.647302904564315 | 52 | 22 | 64.7 | 0 | 2 | 157 | 61 | 112 | OGW83799.1 MAG: hypothetical protein A3C47_04815 [Omnitrophica bacterium RIFCSPHIGHO2_02_FULL_51_18] | diamond | 156 | 74.7 | 1 | Bacteria | PVC group | Pseudomonadati | Candidatus Omnitrophota | Omnitrophica bacterium RIFCSPHIGHO2_02_FULL_51_18 | |||||
| 32362328 | 32362328 | PRJNA806354_P_NODE_38259_length_246_cov_0.890173_g38150_i0 | PRJNA806354 | 38259 | 246 | 0.890173 | 2.18982558 | Candidatus Omnitrophota bacterium | 2035772 | Bacteria | Bacteria | 154 | 5.02e-44 | NR | MDE2028918.1 | 2035772 | g38150 | i0 | 92.5 | 1.95121951219512 | 80 | 6 | 97.6 | 0 | 4 | 243 | 183 | 262 | MDE2028918.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [Candidatus Omnitrophota bacterium] | diamond | 480 | 154 | 1 | Bacteria | PVC group | Pseudomonadati | Candidatus Omnitrophota | Candidatus Omnitrophota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;