RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA806354", tax_clade = "Opisthokonta" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 5 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 5 ✖

bioproject 1

  • PRJNA806354 · 5 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11009841 11009841 PRJNA806354_P_NODE_25609_length_290_cov_20.331797_g25500_i0 PRJNA806354 25609 290 20.331797 58.9622113 Dioszegia hungarica 4972 Fungi Fungi 366 8.44e-97   NTclustered gi|2432175759|ref|XR_008288897.1| 4972 g25500 i0 89.597 136.603448275862 298 18 100 11 1 290 3331 3039 Dioszegia hungarica 25S ribosomal RNA (MKK02DRAFT_277614), rRNA blastn 39615 366 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Bulleribasidiaceae Dioszegia Dioszegia hungarica
16525202 16525202 PRJNA806354_P_NODE_42293_length_230_cov_5.872611_g42184_i0 PRJNA806354 42293 230 5.872611 13.5070053 Bullera 4970 Fungi Fungi 425 1.05e-114   NTclustered gi|452084943|emb|HF569004.1| 57474 g42184 i0 100 99.995652173913 230 0 100 0 1 230 60 289 Bullera unica partial 18S rRNA gene, strain C12 blastn 22999 425 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Bulleraceae Bullera Bullera unica
17384432 17384432 PRJNA806354_P_NODE_8234_length_486_cov_11.331719_g8125_i0 PRJNA806354 8234 486 11.331719 55.07215434 Papiliotrema terrestris 425109 Fungi Fungi 787 0   NTclustered gi|1758753257|emb|LR697097.1| 425109 g8125 i0 95.885 150.024691358025 486 20 100 0 1 486 1773 2258 Papiliotrema terrestris partial 28S rRNA gene blastn 72912 787 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Rhynchogastremaceae Papiliotrema Papiliotrema terrestris
19932670 19932670 PRJNA806354_P_NODE_25436_length_291_cov_9.935780_g25327_i0 PRJNA806354 25436 291 9.93578 28.9131198 Papiliotrema terrestris 425109 Fungi Fungi 433 8.24e-117   NTclustered gi|1758753257|emb|LR697097.1| 425109 g25327 i0 93.471 149.989690721649 291 19 100 0 1 291 2536 2246 Papiliotrema terrestris partial 28S rRNA gene blastn 43647 433 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Rhynchogastremaceae Papiliotrema Papiliotrema terrestris
23758642 23758642 PRJNA806354_P_NODE_32159_length_262_cov_2.169312_g32050_i0 PRJNA806354 32159 262 2.169312 5.68359744 Malassezia globosa 76773 Fungi Fungi 484 1.99e-132   NTclustered gi|1321659512|gb|KY911089.1| 76773 g32050 i0 100 6.02671755725191 262 0 100 0 1 262 29688 29427 Malassezia globosa mitochondrion, complete genome blastn 1579 484 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;