RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

8 rows where bioproject = "PRJNA806354" and tax_clade = "Bacteria candidate phyla"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 8 ✖

bioproject 1

  • PRJNA806354 · 8 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26769278 26769278 PRJNA806354_P_NODE_40641_length_242_cov_0.911243_g40532_i0 PRJNA806354 40641 242 0.911243 2.20520806 Patescibacteria group bacterium 2052139 Bacteria Bacteria 90.5 5.56e-19   NR MDQ5954390.1 2052139 g40532 i0 48.1 0.979338842975207 79 41 97.9 0 239 3 265 343 MDQ5954390.1 hypothetical protein [Patescibacteria group bacterium] diamond 237 90.5 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
28096437 28096437 PRJNA806354_P_NODE_34625_length_253_cov_1.350000_g34516_i0 PRJNA806354 34625 253 1.35 3.4155 Candidatus Saccharibacteria bacterium 32-49-12 1970479 Bacteria Bacteria 104 1.13e-25   NR OYX43789.1 1970479 g34516 i0 70 0.8300395256917 70 21 83 0 252 43 151 220 OYX43789.1 MAG: hypothetical protein B7Y94_01055 [Candidatus Saccharibacteria bacterium 32-49-12] diamond 210 104 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-49-12
29991036 29991036 PRJNA806354_P_NODE_38231_length_246_cov_0.890173_g38122_i0 PRJNA806354 38231 246 0.890173 2.18982558 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 63.5 1.73e-9   NR HET7629994.1 2973664 g38122 i0 42.9 0.853658536585366 70 40 85.4 0 35 244 111 180 HET7629994.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 210 63.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
31128052 31128052 PRJNA806354_P_NODE_39915_length_243_cov_0.905882_g39806_i0 PRJNA806354 39915 243 0.905882 2.20129326 Patescibacteria group bacterium 2052139 Bacteria Bacteria 96.3 5.170000000000001e-21   NR MEK7514630.1 2052139 g39806 i0 59.5 2.90123456790123 79 32 97.5 0 2 238 358 436 MEK7514630.1 prepilin-type N-terminal cleavage/methylation domain-containing protein [Patescibacteria group bacterium] diamond 705 96.3 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31159611 31159611 PRJNA806354_P_NODE_38235_length_246_cov_0.890173_g38126_i0 PRJNA806354 38235 246 0.890173 2.18982558 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 117 1.58e-31   NR MBI4036342.1 2053542 g38126 i0 71.6 0.98780487804878 81 23 98.8 0 243 1 68 148 MBI4036342.1 RpiB/LacA/LacB family sugar-phosphate isomerase [Candidatus Daviesbacteria bacterium] diamond 243 117 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
31191258 31191258 PRJNA806354_P_NODE_40735_length_242_cov_0.911243_g40626_i0 PRJNA806354 40735 242 0.911243 2.20520806 Minisyncoccota bacterium 2053589 Bacteria Bacteria 142 2.42e-37   NR HVY35720.1 2053589 g40626 i0 86.1 1.97107438016529 79 10 97.9 1 239 3 332 409 HVY35720.1 excinuclease ABC subunit UvrA [Candidatus Paceibacterota bacterium] diamond 477 142 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31697655 31697655 PRJNA806354_P_NODE_35957_length_250_cov_0.870056_g35848_i0 PRJNA806354 35957 250 0.870056 2.17514 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 98.6 2.46e-24   NR MBI3103487.1 2053542 g35848 i0 69 1.704 71 22 85.2 0 215 3 33 103 MBI3103487.1 four helix bundle protein [Candidatus Daviesbacteria bacterium] diamond 426 98.6 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
32803777 32803777 PRJNA806354_P_NODE_38820_length_245_cov_0.895349_g38711_i0 PRJNA806354 38820 245 0.895349 2.19360505 Patescibacteria group bacterium 2052139 Bacteria Bacteria 135 4.7e-37   NR MEK7594917.1 2052139 g38711 i0 82.5 0.979591836734694 80 14 98 0 241 2 146 225 MEK7594917.1 ATP synthase F1 subunit gamma [Patescibacteria group bacterium] diamond 240 135 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;