RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA804229" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA804229 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28222566 28222566 PRJNA804229_S_NODE_141866_length_171_cov_1.875000_g140908_i0 PRJNA804229 141866 171 1.875 3.20625 Lentisphaerota bacterium 1932692 Bacteria Bacteria 43.9 0.00548   NR NLB65222.1 1932692 g140908 i0 38.1 0.736842105263158 42 26 73.7 0 24 149 333 374 NLB65222.1 hypothetical protein [Lentisphaerota bacterium] diamond 126 43.9 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
30907439 30907439 PRJNA804229_S_NODE_152734_length_165_cov_1.409836_g151776_i0 PRJNA804229 152734 165 1.409836 2.3262294 Lentisphaerota bacterium 1932692 Bacteria Bacteria 42.4 0.0185   NR NLB65222.1 1932692 g151776 i0 46.3 0.745454545454545 41 22 74.5 0 10 132 352 392 NLB65222.1 hypothetical protein [Lentisphaerota bacterium] diamond 123 42.4 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;