RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA804229" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 2 ✖

bioproject 1

  • PRJNA804229 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30243868 30243868 PRJNA804229_S_NODE_71492_length_240_cov_1.949239_g70534_i0 PRJNA804229 71492 240 1.949239 4.6781736 Chlorella vulgaris 3077 Plants Plants 42.4 0.0499   NR KAL4854308.1 3077 g70534 i0 26.8 0.8875 71 45 80 1 23 214 303 373 KAL4854308.1 Gamma-tubulin complex component 6 [Chlorella vulgaris] diamond 213 42.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
32014011 32014011 PRJNA804229_S_NODE_185218_length_151_cov_1.157407_g184260_i0 PRJNA804229 185218 151 1.157407 1.74768457 Tetrabaena socialis 47790 Plants Plants 39.3 0.0388   NR PNH11191.1 47790 g184260 i0 41.7 0.71523178807947 36 21 71.5 0 23 130 14 49 PNH11191.1 hypothetical protein TSOC_002000 [Tetrabaena socialis] diamond 108 39.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Tetrabaenaceae Tetrabaena Tetrabaena socialis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;