RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA804229", tax_clade = "PVC group" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA804229 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29801328 29801328 PRJNA804229_S_NODE_162231_length_160_cov_1.230769_g161273_i0 PRJNA804229 162231 160 1.230769 1.9692304 Planctomycetaceae bacterium 2026779 Bacteria Bacteria 41.2 0.0423   NR MFM8476281.1 2026779 g161273 i0 43.2 1.44375 37 21 69.4 0 153 43 53 89 MFM8476281.1 sulfite exporter TauE/SafE family protein [Planctomycetaceae bacterium] diamond 231 41.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
30053983 30053983 PRJNA804229_S_NODE_83171_length_223_cov_1.833333_g82213_i0 PRJNA804229 83171 223 1.833333 4.08833259 Phycisphaerae bacterium 2026778 Bacteria Bacteria 43.1 0.0193   NR MBN1513813.1 2026778 g82213 i0 43.8 0.430493273542601 32 18 43 0 194 99 185 216 MBN1513813.1 hypothetical protein [Phycisphaerae bacterium] diamond 96 43.1 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       Phycisphaerae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;