RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA801875" and tax_phylum = "Rotifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA801875 · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18652540 18652540 PRJNA801875_P_NODE_2475_length_219_cov_2.076087_g2372_i0 PRJNA801875 2475 219 2.076087 4.54663053 Lepadella patella 231622 Rotifera other_Eukaryota 309 1.04e-79   NTclustered gi|83285192|gb|DQ297739.1| 231622 g2372 i0 92.558 82.7260273972603 215 16 98 0 4 218 6 220 Lepadella patella 28S ribosomal RNA gene, partial sequence blastn 18117 309 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lepadellidae Lepadella Lepadella patella
22478113 22478113 PRJNA801875_P_NODE_2698_length_206_cov_2.555556_g2595_i0 PRJNA801875 2698 206 2.555556 5.26444536 Encentrum astridae 360661 Rotifera other_Eukaryota 167 6.159999999999999e-37   NTclustered gi|124388846|gb|EF151006.1| 360661 g2595 i0 93.043 24.3009708737864 115 6 55 2 88 201 1907 1794 Encentrum astridae 28S ribosomal RNA gene, partial sequence blastn 5006 167 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Dicranophoridae Encentrum Encentrum astridae
23753763 23753763 PRJNA801875_P_NODE_4259_length_158_cov_2.926829_g4156_i0 PRJNA801875 4259 158 2.926829 4.62438982 Adineta vaga 104782 Rotifera other_Eukaryota 270 3.3099999999999996e-68   NTclustered gi|259129963|gb|GQ398061.1| 104782 g4156 i0 97.468 3.00632911392405 158 4 100 0 1 158 10369 10212 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 475 270 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
27148522 27148522 PRJNA801875_P_NODE_3282_length_182_cov_1.530612_g3179_i0 PRJNA801875 3282 182 1.530612 2.78571384 Adineta steineri 433720 Rotifera other_Eukaryota 78.2 3.04e-15   NR CAF0935085.1 433720 g3179 i0 57.6 4.86263736263736 59 25 97.3 0 4 180 151 209 CAF0935085.1 unnamed protein product [Adineta steineri] diamond 885 78.2 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
29327738 29327738 PRJNA801875_P_NODE_2209_length_238_cov_1.103448_g2106_i0 PRJNA801875 2209 238 1.103448 2.62620624 Adineta steineri 433720 Rotifera other_Eukaryota 55.1 1.43e-6   NR CAF1441499.1 433720 g2106 i0 40 1.63865546218487 65 35 81.9 1 203 9 23 83 CAF1441499.1 unnamed protein product [Adineta steineri] diamond 390 55.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
29683683 29683683 PRJNA801875_P_NODE_2690_length_207_cov_0.988372_g2587_i0 PRJNA801875 2690 207 0.988372 2.04593004 Rotaria 231623 Rotifera other_Eukaryota 43.9 0.00911   NR CAF3330539.1 392032 g2587 i0 34.7 3.6231884057971 49 32 71 0 3 149 580 628 CAF3330539.1 unnamed protein product [Rotaria socialis] diamond 750 43.9 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria socialis
30726465 30726465 PRJNA801875_P_NODE_1994_length_257_cov_1.779279_g1891_i0 PRJNA801875 1994 257 1.779279 4.57274703 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 90.5 1.46e-19   NR UJR26272.1 104782 g1891 i0 52.4 2.90661478599222 84 40 98.1 0 253 2 71 154 UJR26272.1 hypothetical protein I4U23_007612 [Adineta vaga] diamond 747 90.9 0.995599559955996 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
31295306 31295306 PRJNA801875_P_NODE_1355_length_339_cov_3.753289_g1252_i0 PRJNA801875 1355 339 3.753289 12.72364971 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 70.9 1.46e-11   NR CAF1684378.1 392030 g1252 i0 47.6 3.43362831858407 63 33 55.8 0 311 123 181 243 CAF1684378.1 unnamed protein product [Rotaria magnacalcarata] diamond 1164 71.6 0.990223463687151 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
31760856 31760856 PRJNA801875_P_NODE_3417_length_178_cov_1.104895_g3314_i0 PRJNA801875 3417 178 1.104895 1.9667131 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 74.3 3.14e-14   NR CAF1500775.1 1234261 g3314 i0 58.9 1.8876404494382 56 23 94.4 0 171 4 127 182 CAF1500775.1 unnamed protein product, partial [Didymodactylos carnosus] diamond 336 74.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;