RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA801875" and tax_phylum = "Gemmatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Gemmatimonadota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA801875 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26737192 26737192 PRJNA801875_P_NODE_2161_length_241_cov_4.592233_g2058_i0 PRJNA801875 2161 241 4.592233 11.06728153 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 43.1 0.0126   NR MEP6573645.1 2026742 g2058 i0 29.7 1.78008298755187 74 51 92.1 1 238 17 20 92 MEP6573645.1 globin family protein [Gemmatimonadota bacterium] diamond 429 43.1 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
32772250 32772250 PRJNA801875_P_NODE_4500_length_154_cov_1.352941_g4397_i0 PRJNA801875 4500 154 1.352941 2.08352914 Longimicrobiales bacterium 2910168 Bacteria Bacteria 47 3.4e-4   NR MFO7895225.1 2910168 g4397 i0 48 1.94805194805195 50 19 95.5 2 149 3 85 128 MFO7895225.1 ferrochelatase [Longimicrobiales bacterium] diamond 300 47 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales     Longimicrobiales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;