RNAquarium Metadata Server
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contig_metadata

23 rows where bioproject = "PRJNA801875", tax_phylum = "Discosea" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 23 ✖

tax_phylum 1

  • Discosea · 23 ✖

tax_clade 1

bioproject 1

  • PRJNA801875 · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
801043 801043 PRJNA801875_P_NODE_1221_length_363_cov_551.478659_g1118_i0 PRJNA801875 1221 363 551.478659 2001.86753217 Korotnevella jeppesenii 1678066 Discosea other_Eukaryota 468 2.88e-127   NTclustered gi|861553739|gb|KP719185.1| 1678066 g1118 i0 90.191 101.104683195592 367 25 99 9 1 361 1056 1417 Korotnevella jeppesenii strain A1JEPDK small subunit ribosomal RNA gene, partial sequence blastn 36701 468 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Korotnevella Korotnevella jeppesenii
2497272 2497272 PRJNA801875_P_NODE_1722_length_286_cov_3.199203_g1619_i0 PRJNA801875 1722 286 3.199203 9.14972058 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 114 2.5200000000000003e-27   NR XP_004348463.1 1257118 g1619 i0 60.4 1.00699300699301 96 36 98.6 1 3 284 265 360 XP_004348463.1 DEAD box RNA helicase [Acanthamoeba castellanii str. Neff] diamond 288 114 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
4629488 4629488 PRJNA801875_P_NODE_1564_length_305_cov_8.381481_g1461_i0 PRJNA801875 1564 305 8.381481 25.56351705 Paramoeba perurans 437603 Discosea other_Eukaryota 377 4.13e-100   NTclustered gi|145386786|gb|EF216911.1| 437603 g1461 i0 89.667 91.6196721311475 300 25 98 4 4 303 1167 1460 Neoparamoeba perurans strain GD-HAC/2/2 28S large subunit ribosomal RNA gene, partial sequence blastn 27944 377 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba perurans
9729152 9729152 PRJNA801875_P_NODE_2448_length_221_cov_3.634409_g2345_i0 PRJNA801875 2448 221 3.634409 8.03204389 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 115 4.5e-29   NR XP_004338972.1 1257118 g2345 i0 73.8 3.2579185520362 80 13 97.7 1 218 3 74 153 XP_004338972.1 adenine nucleotide translocator, putative [Acanthamoeba castellanii str. Neff] diamond 720 115 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9729166 9729166 PRJNA801875_P_NODE_3648_length_172_cov_0.854015_g3545_i0 PRJNA801875 3648 172 0.854015 1.4689058 Vannella septentrionalis 197531 Discosea other_Eukaryota 268 1.32e-67   NTclustered gi|300078499|gb|GU001161.1| 197531 g3545 i0 95.783 2.22093023255814 166 7 97 0 3 168 907 1072 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 382 268 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
11004974 11004974 PRJNA801875_P_NODE_1889_length_269_cov_3.696581_g1786_i0 PRJNA801875 1889 269 3.696581 9.94380289 Paravannella minima 1443144 Discosea other_Eukaryota 468 2.06e-127   NTclustered gi|571331048|gb|KF895375.1| 1443144 g1786 i0 98.491 36.0520446096654 265 4 99 0 4 268 725 989 Paravannella minima strain CCAP 1533/1 18S ribosomal RNA gene, partial sequence blastn 9698 468 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
13975674 13975674 PRJNA801875_P_NODE_491_length_627_cov_2.251689_g391_i0 PRJNA801875 491 627 2.251689 14.11809003 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 734 0   NTclustered gi|33946348|gb|AY294153.1| 197527 g391 i0 88.045 99.4673046251994 619 74 99 0 9 627 954 336 Platyamoeba placida actin mRNA, partial cds blastn 62366 734 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
16103626 16103626 PRJNA801875_P_NODE_753_length_490_cov_3.002198_g651_i0 PRJNA801875 753 490 3.002198 14.7107702 Cochliopodium arabianum 1676989 Discosea other_Eukaryota 315 5.52e-81   NTclustered gi|667063467|gb|KJ781461.1| 1676989 g651 i0 79.079 94 478 85 97 5 1 475 155 620 Cochliopodium arabianum clone YT220 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial blastn 46060 315 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium arabianum
17379478 17379478 PRJNA801875_P_NODE_3934_length_165_cov_1.692308_g3831_i0 PRJNA801875 3934 165 1.692308 2.7923082 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 76.3 7.27e-15   NR XP_004355015.1 1257118 g3831 i0 68.5 2.90909090909091 54 17 98.2 0 164 3 212 265 XP_004355015.1 Factin-capping protein subunit beta, putative [Acanthamoeba castellanii str. Neff] diamond 480 76.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
20348132 20348132 PRJNA801875_P_NODE_956_length_425_cov_886.702564_g853_i0 PRJNA801875 956 425 886.702564 3768.485897 Vannella 95228 Discosea other_Eukaryota 669 0   NTclustered gi|399764213|gb|JQ271724.1| 1215628 g853 i0 96.543 95.7035294117647 405 13 95 1 19 422 1496 1900 Vannella sp. ACN1 18S ribosomal RNA gene, partial sequence blastn 40674 671 0.997019374068554 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. ACN1
25027609 25027609 PRJNA801875_P_NODE_3800_length_168_cov_1.406015_g3697_i0 PRJNA801875 3800 168 1.406015 2.3621052 Cochliopodium larifeili 1017091 Discosea other_Eukaryota 250 4.66e-62   NTclustered gi|330902855|gb|JF298253.1| 1017091 g3697 i0 93.976 6.40476190476191 166 8 98 2 3 166 1270 1105 Cochliopodium larifeili clone 901 18S ribosomal RNA gene, partial sequence blastn 1076 250 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili
25027611 25027611 PRJNA801875_P_NODE_40_length_1863_cov_6.299234_g20_i0 PRJNA801875 40 1863 6.299234 117.35472942 root 1 Root_unresolved Root_unresolved 541 2.16e-184   NR YP_009557814.1 1443144 g20 i0 62.4 33.3590982286634 450 158 71.2 3 1465 140 33 479 YP_009557814.1 hypothetical protein [Paravannella minima] diamond 62148 541 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
27157521 27157521 PRJNA801875_P_NODE_3702_length_170_cov_1.962963_g3599_i0 PRJNA801875 3702 170 1.962963 3.3370371 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 80.1 2.11e-16   NR AEL74960.1 180228 g3599 i0 64.3 4.94117647058824 56 20 98.8 0 168 1 141 196 AEL74960.1 elongation factor 2, partial [Paramoeba pemaquidensis] diamond 840 80.9 0.990111248454882 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
28380588 28380588 PRJNA801875_P_NODE_1946_length_262_cov_2.387665_g1843_i0 PRJNA801875 1946 262 2.387665 6.2556823 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 119 2.24e-32   NR 7SOG_A 5755 g1843 i0 59.3 2.96564885496183 86 35 98.5 0 4 261 3 88 7SOG_A Chain A, Actophorin [Acanthamoeba castellanii] diamond 777 119 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29359492 29359492 PRJNA801875_P_NODE_2449_length_221_cov_1.725806_g2346_i0 PRJNA801875 2449 221 1.725806 3.81403126 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 66.2 1.45e-10   NR XP_004334405.1 1257118 g2346 i0 58.2 0.746606334841629 55 22 74.7 1 53 217 338 391 XP_004334405.1 DEAD/DEAH box helicase domain containing protein [Acanthamoeba castellanii str. Neff] diamond 165 66.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29927969 29927969 PRJNA801875_P_NODE_4431_length_155_cov_1.783333_g4328_i0 PRJNA801875 4431 155 1.783333 2.76416615 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 69.3 8.29e-13   NR XP_004349728.1 1257118 g4328 i0 62 0.967741935483871 50 19 96.8 0 150 1 117 166 XP_004349728.1 Rho family, small GTP binding protein Rac3, putative [Acanthamoeba castellanii str. Neff] diamond 150 69.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29959342 29959342 PRJNA801875_P_NODE_411_length_697_cov_2.998489_g316_i0 PRJNA801875 411 697 2.998489 20.89946833 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 196 4.77e-59   NR XP_004340229.1 1257118 g316 i0 60.2 0.822094691535151 191 64 78.3 5 21 566 9 196 XP_004340229.1 ribosomal protein L6e, putative [Acanthamoeba castellanii str. Neff] diamond 573 196 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30243866 30243866 PRJNA801875_P_NODE_3512_length_175_cov_1.135714_g3409_i0 PRJNA801875 3512 175 1.135714 1.9874995 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 58.9 2.95e-8   NR XP_004334239.1 1257118 g3409 i0 68.6 0.6 35 11 60 0 4 108 604 638 XP_004334239.1 MYC binding protein 2, putative [Acanthamoeba castellanii str. Neff] diamond 105 58.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30528020 30528020 PRJNA801875_P_NODE_2633_length_209_cov_2.896552_g2530_i0 PRJNA801875 2633 209 2.896552 6.05379368 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 62 9.49e-11   NR XP_004337533.1 1257118 g2530 i0 44.6 0.933014354066986 65 36 93.3 0 197 3 1 65 XP_004337533.1 uncharacterized protein ACA1_163480 [Acanthamoeba castellanii str. Neff] diamond 195 62 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30654346 30654346 PRJNA801875_P_NODE_3373_length_179_cov_2.361111_g3270_i0 PRJNA801875 3373 179 2.361111 4.22638869 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 45.8 0.0013   NR XP_004336217.1 1257118 g3270 i0 49 0.82122905027933 49 25 82.1 0 154 8 222 270 XP_004336217.1 SH2 domain containing protein [Acanthamoeba castellanii str. Neff] diamond 147 45.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30938995 30938995 PRJNA801875_P_NODE_2154_length_242_cov_1.487923_g2051_i0 PRJNA801875 2154 242 1.487923 3.60077366 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 137 3.8e-39   NR XP_004368112.1 1257118 g2051 i0 82.2 3.6198347107438 73 13 90.5 0 22 240 1 73 XP_004368112.1 ribosomal protein L24e, putative [Acanthamoeba castellanii str. Neff] diamond 876 137 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30970556 30970556 PRJNA801875_P_NODE_4114_length_161_cov_1.841270_g4011_i0 PRJNA801875 4114 161 1.84127 2.9644447 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 69.7 3.46e-12   NR XP_004339463.1 1257118 g4011 i0 64.7 0.950310559006211 51 18 95 0 156 4 327 377 XP_004339463.1 Rad23, putative [Acanthamoeba castellanii str. Neff] diamond 153 69.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31919112 31919112 PRJNA801875_P_NODE_2397_length_225_cov_0.821053_g2294_i0 PRJNA801875 2397 225 0.821053 1.84736925 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 57 2.87e-7   NR XP_004367975.1 1257118 g2294 i0 39.7 0.973333333333333 73 43 97.3 1 4 222 578 649 XP_004367975.1 tetratricopeptide repeat domain containing protein [Acanthamoeba castellanii str. Neff] diamond 219 57 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;