contig_metadata
10 rows where bioproject = "PRJNA801875", tax_phylum = "Bdellovibrionota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 801061 | 801061 | PRJNA801875_P_NODE_3761_length_169_cov_1.179104_g3658_i0 | PRJNA801875 | 3761 | 169 | 1.179104 | 1.99268576 | Pseudobdellovibrio exovorus | 453816 | Bacteria | Bacteria | 113 | 6.3800000000000005e-21 | NTclustered | gi|469929247|gb|CP003537.1| | 1184267 | g3658 | i0 | 80.982 | 0.964497041420118 | 163 | 13 | 88 | 9 | 8 | 156 | 878319 | 878477 | Bdellovibrio exovorus JSS, complete genome | blastn | 163 | 113 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 4629500 | 4629500 | PRJNA801875_P_NODE_2824_length_200_cov_4.303030_g2721_i0 | PRJNA801875 | 2824 | 200 | 4.30303 | 8.60606 | Bdellovibrio sp. NC01 | 2220073 | Bacteria | Bacteria | 65.8 | 2.23e-6 | NTclustered | gi|1700686220|gb|CP030034.1| | 2220073 | g2721 | i0 | 88.679 | 0.265 | 53 | 6 | 27 | 0 | 95 | 147 | 1088831 | 1088883 | Bdellovibrio sp. NC01 chromosome, complete genome | blastn | 53 | 65.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. NC01 | ||
| 9729174 | 9729174 | PRJNA801875_P_NODE_4008_length_164_cov_0.922481_g3905_i0 | PRJNA801875 | 4008 | 164 | 0.922481 | 1.51286884 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 60.2 | 8.18e-5 | NTclustered | gi|578016248|gb|CP002190.1| | 765869 | g3905 | i0 | 97.143 | 19.3048780487805 | 35 | 1 | 21 | 0 | 10 | 44 | 35115 | 35081 | Bdellovibrio bacteriovorus W, complete genome | blastn | 3166 | 60.2 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 13975652 | 13975652 | PRJNA801875_P_NODE_2291_length_231_cov_21.596939_g2188_i0 | PRJNA801875 | 2291 | 231 | 21.596939 | 49.88892909 | root | 1 | Root_unresolved | Root_unresolved | 294 | 3.11e-75 | NTclustered | gi|2800948966|gb|CP168973.1| | 959 | g2188 | i0 | 89.655 | 168.562770562771 | 232 | 22 | 100 | 2 | 1 | 231 | 1677507 | 1677277 | Bdellovibrio bacteriovorus strain HK2 chromosome, complete genome | blastn | 38938 | 294 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 21623837 | 21623837 | PRJNA801875_P_NODE_737_length_496_cov_13.783080_g635_i0 | PRJNA801875 | 737 | 496 | 13.78308 | 68.3640768 | Bdellovibrio | 958 | Bacteria | Bacteria | 368 | 4.23e-97 | NTclustered | gi|2800948966|gb|CP168973.1| | 959 | g635 | i0 | 80.439 | 199.010080645161 | 501 | 82 | 99 | 12 | 1 | 491 | 1676850 | 1676356 | Bdellovibrio bacteriovorus strain HK2 chromosome, complete genome | blastn | 98709 | 368 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 27054216 | 27054216 | PRJNA801875_P_NODE_4362_length_156_cov_3.165289_g4259_i0 | PRJNA801875 | 4362 | 156 | 3.165289 | 4.93785084 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 83.2 | 3.6e-17 | NR | MFA7277246.1 | 2026715 | g4259 | i0 | 76 | 0.961538461538462 | 50 | 12 | 96.2 | 0 | 151 | 2 | 26 | 75 | MFA7277246.1 alkene reductase [Pseudobdellovibrionaceae bacterium] | diamond | 150 | 83.2 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 29936741 | 29936741 | PRJNA801875_P_NODE_3091_length_189_cov_1.500000_g2988_i0 | PRJNA801875 | 3091 | 189 | 1.5 | 2.835 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 114 | 1.03e-27 | NR | NUN04832.1 | 28201 | g2988 | i0 | 86.7 | 36.3174603174603 | 60 | 8 | 95.2 | 0 | 184 | 5 | 489 | 548 | NUN04832.1 acetate--CoA ligase [Bdellovibrio sp.] | diamond | 6864 | 115 | 0.991304347826087 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. | ||
| 30243862 | 30243862 | PRJNA801875_P_NODE_1912_length_267_cov_1.943966_g1809_i0 | PRJNA801875 | 1912 | 267 | 1.943966 | 5.19038922 | Bacteriovorax stolpii | 960 | Bacteria | Bacteria | 74.7 | 2.72e-13 | NR | WP_102242354.1 | 960 | g1809 | i0 | 54.5 | 1.48314606741573 | 66 | 29 | 74.2 | 1 | 225 | 28 | 6 | 70 | WP_102242354.1 NAD-dependent epimerase/dehydratase family protein [Bacteriovorax stolpii] | diamond | 396 | 74.7 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 30622710 | 30622710 | PRJNA801875_P_NODE_2473_length_219_cov_2.163043_g2370_i0 | PRJNA801875 | 2473 | 219 | 2.163043 | 4.73706417 | Bacteriovoracaceae bacterium | 2081706 | Bacteria | Bacteria | 65.9 | 1.19e-11 | NR | MFT6069331.1 | 2081706 | g2370 | i0 | 58.1 | 4.28767123287671 | 43 | 18 | 58.9 | 0 | 88 | 216 | 63 | 105 | MFT6069331.1 putative membrane protein YedE/YeeE [Bacteriovoracaceae bacterium] | diamond | 939 | 65.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium | |||
| 31919117 | 31919117 | PRJNA801875_P_NODE_877_length_447_cov_1.667476_g775_i0 | PRJNA801875 | 877 | 447 | 1.667476 | 7.45361772 | Bdellovibrionia bacterium | 3034169 | Bacteria | Bacteria | 206 | 4.13e-63 | NR | MEO5969990.1 | 3034169 | g775 | i0 | 67.4 | 0.966442953020134 | 144 | 47 | 96.6 | 0 | 440 | 9 | 85 | 228 | MEO5969990.1 NAD(P)H-quinone oxidoreductase [Bdellovibrionia bacterium] | diamond | 432 | 206 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionia bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;