RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

29 rows where bioproject = "PRJNA801875", tax_clade = "Sar" and tax_phylum = "Cercozoa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 29 ✖

tax_clade 1

  • Sar · 29 ✖

bioproject 1

  • PRJNA801875 · 29 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
801071 801071 PRJNA801875_P_NODE_4421_length_155_cov_1.975000_g4318_i0 PRJNA801875 4421 155 1.975 3.06125 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 156 9.44e-34   NTclustered gi|238617605|gb|FJ973380.1| 45107 g4318 i0 86.207 89.058064516129 145 18 93 2 7 150 1534 1391 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 13804 156 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
3351994 3351994 PRJNA801875_P_NODE_3983_length_164_cov_1.503876_g3880_i0 PRJNA801875 3983 164 1.503876 2.46635664 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 217 4.589999999999999e-52   NTclustered gi|756877536|ref|NC_026310.1| 372086 g3880 i0 91.25 0.975609756097561 160 13 98 1 5 164 18853 19011 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 160 217 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
5904569 5904569 PRJNA801875_P_NODE_2985_length_193_cov_2.905063_g2882_i0 PRJNA801875 2985 193 2.905063 5.60677159 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 228 2.579999999999999e-55   NTclustered gi|238617605|gb|FJ973380.1| 45107 g2882 i0 88.482 22.2849740932642 191 18 97 4 3 190 2182 2371 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 4301 228 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
5904596 5904596 PRJNA801875_P_NODE_985_length_417_cov_3.630890_g882_i0 PRJNA801875 985 417 3.63089 15.1408113 Paulinella micropora 1928728 SAR_Eukaryotes SAR_Eukaryotes 95.3 6.57e-15   NTclustered gi|1767048364|dbj|LC490352.1| 1928728 g882 i0 98.148 0.808153477218225 54 1 13 0 33 86 13202 13149 Paulinella micropora MYN1 mitochondrial DNA, complete sequence blastn 337 95.3 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella micropora
7179412 7179412 PRJNA801875_P_NODE_3926_length_165_cov_1.815385_g3823_i0 PRJNA801875 3926 165 1.815385 2.99538525 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 167 4.72e-37   NTclustered gi|756877536|ref|NC_026310.1| 372086 g3823 i0 87.248 0.903030303030303 149 16 90 3 4 151 25225 25371 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 149 167 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
9729135 9729135 PRJNA801875_P_NODE_1068_length_393_cov_29.120112_g965_i0 PRJNA801875 1068 393 29.120112 114.44204016 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 390 7.01e-104   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g965 i0 86.243 59.3511450381679 378 31 95 12 17 390 4018 3658 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 23325 390 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
9729165 9729165 PRJNA801875_P_NODE_3628_length_172_cov_1.700730_g3525_i0 PRJNA801875 3628 172 1.70073 2.9252556 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 126 8.38e-25   NTclustered gi|756877536|ref|NC_026310.1| 372086 g3525 i0 81.818 0.895348837209302 154 24 89 4 1 153 17685 17535 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 154 126 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
9729173 9729173 PRJNA801875_P_NODE_3968_length_164_cov_2.713178_g3865_i0 PRJNA801875 3968 164 2.713178 4.44961192 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 141 2.84e-29   NTclustered gi|756877536|ref|NC_026310.1| 372086 g3865 i0 84.138 0.884146341463415 145 23 88 0 17 161 278 134 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 145 141 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
9729182 9729182 PRJNA801875_P_NODE_608_length_557_cov_179.789272_g508_i0 PRJNA801875 608 557 179.789272 1001.42624504 Gymnophrys sp. ATCC 50923 646463 SAR_Eukaryotes SAR_Eukaryotes 937 0   NTclustered gi|238617604|gb|FJ973379.1| 646463 g508 i0 98.496 39.0251346499102 532 6 95 2 1 531 320 850 Gymnophrys sp. ATCC 50923 28S ribosomal RNA gene, partial sequence blastn 21737 937 1 Eukaryota Sar   Cercozoa       Gymnophrys Gymnophrys sp. ATCC 50923
11004982 11004982 PRJNA801875_P_NODE_2809_length_201_cov_1.807229_g2706_i0 PRJNA801875 2809 201 1.807229 3.63253029 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 289 1.2199999999999998e-73   NTclustered gi|756877536|ref|NC_026310.1| 372086 g2706 i0 92.537 1.4228855721393 201 15 100 0 1 201 1844 2044 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 286 289 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
11425552 11425552 PRJNA801875_P_NODE_189_length_1011_cov_646.012295_g123_i0 PRJNA801875 189 1011 646.012295 6531.18430245 Gymnophrys 188963 SAR_Eukaryotes SAR_Eukaryotes 712 0   NTclustered gi|38640506|gb|AF411284.1| 188964 g123 i0 96.322 42.4193867457962 435 13 43 3 580 1011 1 435 Gymnophrys cometa 18S ribosomal RNA gene, complete sequence blastn 42886 717 0.99302649930265 Eukaryota Sar   Cercozoa       Gymnophrys Gymnophrys cometa
11425564 11425564 PRJNA801875_P_NODE_329_length_795_cov_39.160526_g244_i0 PRJNA801875 329 795 39.160526 311.3261817 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 193 4.51e-44   NTclustered gi|238617605|gb|FJ973380.1| 45107 g244 i0 91.489 25.5584905660377 141 10 25 2 1 141 1664 1526 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 20319 193 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
14829505 14829505 PRJNA801875_P_NODE_3492_length_175_cov_3.650000_g3389_i0 PRJNA801875 3492 175 3.65 6.3875 Cercomonas sp. C59 372078 SAR_Eukaryotes SAR_Eukaryotes 148 1.83e-31   NTclustered gi|88792584|gb|DQ386165.1| 372078 g3389 i0 82.659 34.8171428571429 173 24 96 5 1 168 2243 2072 Cercomonas sp. C59 28S ribosomal RNA gene, partial sequence blastn 6093 148 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. C59
14829532 14829532 PRJNA801875_P_NODE_992_length_416_cov_2.265092_g889_i0 PRJNA801875 992 416 2.265092 9.42278272 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 346 1.6399999999999999e-90   NTclustered gi|756877536|ref|NC_026310.1| 372086 g889 i0 82.227 1.01442307692308 422 56 99 15 1 410 725 1139 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 422 346 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
16103618 16103618 PRJNA801875_P_NODE_4633_length_152_cov_1.350427_g4530_i0 PRJNA801875 4633 152 1.350427 2.05264904 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 187 3.27e-43   NTclustered gi|756877536|ref|NC_026310.1| 372086 g4530 i0 89.796 0.967105263157895 147 14 97 1 6 152 1610 1755 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 147 187 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
16524551 16524551 PRJNA801875_P_NODE_1013_length_409_cov_75.855615_g910_i0 PRJNA801875 1013 409 75.855615 310.24946535 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 743 0   NTclustered gi|31337495|emb|AJ514866.1| 188964 g910 i0 99.51 98.7481662591687 408 2 99 0 1 408 998 591 Gymnophrys cometa 18S rRNA gene blastn 40388 743 1 Eukaryota Sar   Cercozoa       Gymnophrys Gymnophrys cometa
18652531 18652531 PRJNA801875_P_NODE_1855_length_273_cov_2.714286_g1752_i0 PRJNA801875 1855 273 2.714286 7.41000078 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 381 2.809999999999999e-101   NTclustered gi|756877536|ref|NC_026310.1| 372086 g1752 i0 92.481 0.974358974358974 266 20 97 0 4 269 381 646 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 266 381 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
18652575 18652575 PRJNA801875_P_NODE_775_length_480_cov_209.332584_g673_i0 PRJNA801875 775 480 209.332584 1004.7964032 Cercomonas sp. HFCC549 458874 SAR_Eukaryotes SAR_Eukaryotes 848 0   NTclustered gi|161015714|gb|EF681948.1| 458874 g673 i0 98.542 48.2458333333333 480 7 100 0 1 480 679 200 Cercomonas sp. HFCC549 28S ribosomal RNA gene, partial sequence blastn 23158 848 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. HFCC549
21203435 21203435 PRJNA801875_P_NODE_1137_length_378_cov_9.172012_g1034_i0 PRJNA801875 1137 378 9.172012 34.67020536 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 435 3.0600000000000003e-117   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g1034 i0 88.14 58.5502645502646 371 36 98 7 7 375 4022 3658 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 22132 435 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
21203436 21203436 PRJNA801875_P_NODE_1177_length_371_cov_50.383929_g1074_i0 PRJNA801875 1177 371 50.383929 186.92437659 Gymnophrys sp. ATCC 50923 646463 SAR_Eukaryotes SAR_Eukaryotes 608 1.6699999999999992e-169   NTclustered gi|238617604|gb|FJ973379.1| 646463 g1074 i0 98.551 98.8032345013477 345 4 93 1 28 371 1 345 Gymnophrys sp. ATCC 50923 28S ribosomal RNA gene, partial sequence blastn 36656 608 1 Eukaryota Sar   Cercozoa       Gymnophrys Gymnophrys sp. ATCC 50923
21203445 21203445 PRJNA801875_P_NODE_2177_length_240_cov_14.185366_g2074_i0 PRJNA801875 2177 240 14.185366 34.0448784 Gymnophrys sp. ATCC 50923 646463 SAR_Eukaryotes SAR_Eukaryotes 435 1.83e-117   NTclustered gi|238617604|gb|FJ973379.1| 646463 g2074 i0 99.58 61.8541666666667 238 1 99 0 3 240 2600 2837 Gymnophrys sp. ATCC 50923 28S ribosomal RNA gene, partial sequence blastn 14845 435 1 Eukaryota Sar   Cercozoa       Gymnophrys Gymnophrys sp. ATCC 50923
21203458 21203458 PRJNA801875_P_NODE_3297_length_181_cov_14.835616_g3194_i0 PRJNA801875 3297 181 14.835616 26.85246496 Gymnophrys sp. ATCC 50923 646463 SAR_Eukaryotes SAR_Eukaryotes 335 1.36e-87   NTclustered gi|238617604|gb|FJ973379.1| 646463 g3194 i0 100 100.430939226519 181 0 100 0 1 181 1426 1606 Gymnophrys sp. ATCC 50923 28S ribosomal RNA gene, partial sequence blastn 18178 335 1 Eukaryota Sar   Cercozoa       Gymnophrys Gymnophrys sp. ATCC 50923
21623834 21623834 PRJNA801875_P_NODE_4537_length_153_cov_8.584746_g4434_i0 PRJNA801875 4537 153 8.584746 13.13466138 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 279 5.28e-71   NTclustered gi|38640506|gb|AF411284.1| 188964 g4434 i0 100 99.6535947712418 151 0 99 0 1 151 1321 1471 Gymnophrys cometa 18S ribosomal RNA gene, complete sequence blastn 15247 279 1 Eukaryota Sar   Cercozoa       Gymnophrys Gymnophrys cometa
22478118 22478118 PRJNA801875_P_NODE_2958_length_194_cov_33.616352_g2855_i0 PRJNA801875 2958 194 33.616352 65.21572288 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 331 1.92e-86   NTclustered gi|88792583|gb|DQ386164.1| 372086 g2855 i0 97.906 50.8556701030928 191 4 98 0 1 191 2718 2528 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 9866 331 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
23753725 23753725 PRJNA801875_P_NODE_1079_length_391_cov_23.851124_g976_i0 PRJNA801875 1079 391 23.851124 93.25789484 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 401 3.2199999999999987e-107   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g976 i0 85.969 57.2710997442455 392 36 99 15 4 391 3658 4034 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 22393 401 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
23753727 23753727 PRJNA801875_P_NODE_1179_length_371_cov_12.532738_g1076_i0 PRJNA801875 1179 371 12.532738 46.49645798 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 422 2.33e-113   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g1076 i0 88.219 59.9137466307278 365 28 98 8 5 368 4008 3658 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 22228 422 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
23753754 23753754 PRJNA801875_P_NODE_3239_length_183_cov_11.804054_g3136_i0 PRJNA801875 3239 183 11.804054 21.60141882 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 305 1.08e-78   NTclustered gi|88792583|gb|DQ386164.1| 372086 g3136 i0 97.222 99.3606557377049 180 5 98 0 1 180 1536 1357 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 18183 305 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
23753759 23753759 PRJNA801875_P_NODE_3999_length_164_cov_1.193798_g3896_i0 PRJNA801875 3999 164 1.193798 1.95782872 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 204 3.5699999999999997e-48   NTclustered gi|756877536|ref|NC_026310.1| 372086 g3896 i0 89.024 1 164 18 100 0 1 164 17998 18161 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 164 204 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
26619829 26619829 PRJNA801875_P_NODE_4621_length_152_cov_1.641026_g4518_i0 PRJNA801875 4621 152 1.641026 2.49435952 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 79.3 1.31e-15   NR MES1906957.1 1215613 g4518 i0 83.3 3.61184210526316 42 7 82.9 0 25 150 422 463 MES1906957.1 hypothetical protein [Cercozoa sp. M6MM] diamond 549 80.1 0.990012484394507 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;