contig_metadata
23 rows where bioproject = "PRJNA801875" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3351969 | 3351969 | PRJNA801875_P_NODE_1703_length_289_cov_1.496063_g1600_i0 | PRJNA801875 | 1703 | 289 | 1.496063 | 4.32362207 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 331 | 3.07e-86 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g1600 | i0 | 87.805 | 189.314878892734 | 287 | 30 | 98 | 4 | 3 | 286 | 655090 | 655374 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 54712 | 331 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 3352006 | 3352006 | PRJNA801875_P_NODE_63_length_1602_cov_7.909381_g37_i0 | PRJNA801875 | 63 | 1602 | 7.909381 | 126.70828362 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 2143 | 0 | NTclustered | gi|1927958621|gb|CP054186.1| | 2026777 | g37 | i0 | 90.875 | 355.411985018727 | 1611 | 127 | 99 | 16 | 1 | 1599 | 1867800 | 1866198 | MAG: Phycisphaeraceae bacterium isolate H1_PLA1 chromosome | blastn | 569370 | 2143 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 7179396 | 7179396 | PRJNA801875_P_NODE_266_length_878_cov_5.584816_g188_i0 | PRJNA801875 | 266 | 878 | 5.584816 | 49.03468448 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 1314 | 0 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g188 | i0 | 93.95 | 165.386104783599 | 876 | 41 | 99 | 12 | 1 | 867 | 2019352 | 2018480 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 145209 | 1314 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 9729153 | 9729153 | PRJNA801875_P_NODE_2468_length_219_cov_4.048913_g2365_i0 | PRJNA801875 | 2468 | 219 | 4.048913 | 8.86711947 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 335 | 1.7199999999999992e-87 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g2365 | i0 | 94.86 | 128.643835616438 | 214 | 11 | 98 | 0 | 3 | 216 | 2020229 | 2020016 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 28173 | 335 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 14829486 | 14829486 | PRJNA801875_P_NODE_1392_length_332_cov_4.767677_g1289_i0 | PRJNA801875 | 1392 | 332 | 4.767677 | 15.82868764 | Bacteria | 2 | Bacteria | Bacteria | 109 | 9.42e-27 | NR | WP_006341469.1 | 83552 | g1289 | i0 | 74.3 | 8.06024096385542 | 70 | 18 | 63.3 | 0 | 312 | 103 | 1 | 70 | WP_006341469.1 SDR family NAD(P)-dependent oxidoreductase [Parachlamydia acanthamoebae] | diamond | 2676 | 110 | 0.990909090909091 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia acanthamoebae | |
| 14829498 | 14829498 | PRJNA801875_P_NODE_2712_length_205_cov_3.835294_g2609_i0 | PRJNA801875 | 2712 | 205 | 3.835294 | 7.8623527 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 313 | 7.4399999999999995e-81 | NTclustered | gi|1927958621|gb|CP054186.1| | 2026777 | g2609 | i0 | 94.146 | 338.892682926829 | 205 | 12 | 100 | 0 | 1 | 205 | 1868496 | 1868292 | MAG: Phycisphaeraceae bacterium isolate H1_PLA1 chromosome | blastn | 69473 | 313 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 15249858 | 15249858 | PRJNA801875_P_NODE_2472_length_219_cov_2.500000_g2369_i0 | PRJNA801875 | 2472 | 219 | 2.5 | 5.475 | Bacteria | 2 | Bacteria | Bacteria | 219 | 1.8099999999999993e-52 | NTclustered | gi|2874253676|emb|OY969110.1| | 305355 | g2369 | i0 | 85.377 | 117.972602739726 | 212 | 29 | 97 | 2 | 5 | 216 | 415119 | 415328 | MAG: uncultured Chlamydiae bacterium isolate MFD00082.bin.c.5 genome assembly, chromosome: 1 | blastn | 25836 | 220 | 0.995454545454545 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | uncultured Chlamydiae bacterium | ||||
| 15249880 | 15249880 | PRJNA801875_P_NODE_652_length_534_cov_1.687375_g550_i0 | PRJNA801875 | 652 | 534 | 1.687375 | 9.0105825 | Opitutaceae | 134623 | Bacteria | Bacteria | 95.3 | 8.59e-15 | NTclustered | gi|573471959|gb|CP007053.1| | 794903 | g550 | i0 | 76.216 | 18.9569288389513 | 185 | 40 | 34 | 4 | 141 | 323 | 2149300 | 2149118 | Opitutaceae bacterium TAV5, complete genome | blastn | 10123 | 95.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium TAV5 | ||
| 17379468 | 17379468 | PRJNA801875_P_NODE_3134_length_187_cov_2.980263_g3031_i0 | PRJNA801875 | 3134 | 187 | 2.980263 | 5.57309181 | uncultured Chlamydiae bacterium | 305355 | Bacteria | Bacteria | 322 | 1.1e-83 | NTclustered | gi|116292835|gb|DQ996922.1| | 305355 | g3031 | i0 | 97.849 | 106.48128342246 | 186 | 4 | 99 | 0 | 2 | 187 | 581 | 396 | Uncultured Chlamydiae bacterium clone MD2896-0.1m.78 16S ribosomal RNA gene, partial sequence | blastn | 19912 | 322 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | uncultured Chlamydiae bacterium | ||||
| 17379482 | 17379482 | PRJNA801875_P_NODE_4274_length_158_cov_1.666667_g4171_i0 | PRJNA801875 | 4274 | 158 | 1.666667 | 2.63333386 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 230 | 5.619999999999999e-56 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g4171 | i0 | 94.595 | 311.291139240506 | 148 | 8 | 94 | 0 | 10 | 157 | 655043 | 654896 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 49184 | 230 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 17379488 | 17379488 | PRJNA801875_P_NODE_594_length_565_cov_4.316981_g494_i0 | PRJNA801875 | 594 | 565 | 4.316981 | 24.39094265 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 867 | 0 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g494 | i0 | 94.504 | 232.053097345133 | 564 | 27 | 99 | 4 | 4 | 565 | 4212510 | 4211949 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 131110 | 867 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 27591462 | 27591462 | PRJNA801875_P_NODE_2664_length_208_cov_1.346821_g2561_i0 | PRJNA801875 | 2664 | 208 | 1.346821 | 2.80138768 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 84.3 | 7.68e-18 | NR | HKE02376.1 | 2026780 | g2561 | i0 | 64.7 | 1.96153846153846 | 68 | 23 | 96.6 | 1 | 206 | 6 | 144 | 211 | HKE02376.1 glucose 1-dehydrogenase [Planctomycetota bacterium] | diamond | 408 | 84.3 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 28443931 | 28443931 | PRJNA801875_P_NODE_666_length_527_cov_2.611789_g564_i0 | PRJNA801875 | 666 | 527 | 2.611789 | 13.76412803 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 262 | 1.27e-84 | NR | RYD65414.1 | 2026800 | g564 | i0 | 73 | 0.990512333965844 | 174 | 45 | 99.1 | 1 | 523 | 2 | 146 | 317 | RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium] | diamond | 522 | 262 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 28790940 | 28790940 | PRJNA801875_P_NODE_1307_length_348_cov_2.977636_g1204_i0 | PRJNA801875 | 1307 | 348 | 2.977636 | 10.36217328 | Chthoniobacteraceae bacterium | 2811408 | Bacteria | Bacteria | 152 | 1.3399999999999996e-43 | NR | HEY2344067.1 | 2811408 | g1204 | i0 | 67 | 1.98275862068966 | 115 | 38 | 99.1 | 0 | 346 | 2 | 27 | 141 | HEY2344067.1 glucose 1-dehydrogenase [Chthoniobacteraceae bacterium] | diamond | 690 | 152 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacteraceae bacterium | ||
| 28822341 | 28822341 | PRJNA801875_P_NODE_2408_length_224_cov_1.407407_g2305_i0 | PRJNA801875 | 2408 | 224 | 1.407407 | 3.15259168 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 124 | 1.7199999999999995e-31 | NR | MCK6445862.1 | 2026780 | g2305 | i0 | 75.3 | 6.80357142857143 | 73 | 18 | 97.8 | 0 | 221 | 3 | 197 | 269 | MCK6445862.1 cystathionine beta-synthase [Planctomycetota bacterium] | diamond | 1524 | 124 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 28854042 | 28854042 | PRJNA801875_P_NODE_3128_length_188_cov_1.228758_g3025_i0 | PRJNA801875 | 3128 | 188 | 1.228758 | 2.31006504 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 82 | 1.57e-16 | NR | RYD71398.1 | 2026800 | g3025 | i0 | 62.3 | 0.973404255319149 | 61 | 23 | 97.3 | 0 | 184 | 2 | 229 | 289 | RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium] | diamond | 183 | 82 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 30338971 | 30338971 | PRJNA801875_P_NODE_2532_length_215_cov_1.872222_g2429_i0 | PRJNA801875 | 2532 | 215 | 1.872222 | 4.0252773 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 81.6 | 9.57e-17 | NR | HEY8903241.1 | 2201154 | g2429 | i0 | 60.3 | 5.41395348837209 | 63 | 25 | 87.9 | 0 | 6 | 194 | 32 | 94 | HEY8903241.1 SDR family oxidoreductase [Chthoniobacterales bacterium] | diamond | 1164 | 81.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 30654344 | 30654344 | PRJNA801875_P_NODE_1993_length_257_cov_1.815315_g1890_i0 | PRJNA801875 | 1993 | 257 | 1.815315 | 4.66535955 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 46.6 | 0.00203 | NR | GDY11708.1 | 2026780 | g1890 | i0 | 43.9 | 1.4124513618677 | 57 | 28 | 65.4 | 2 | 237 | 70 | 3022 | 3075 | GDY11708.1 hypothetical protein LBMAG53_05860 [Planctomycetota bacterium] | diamond | 363 | 46.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 31065455 | 31065455 | PRJNA801875_P_NODE_1895_length_269_cov_1.606838_g1792_i0 | PRJNA801875 | 1895 | 269 | 1.606838 | 4.32239422 | Planctomycetaceae bacterium | 2026779 | Bacteria | Bacteria | 105 | 5.59e-25 | NR | MAG94705.1 | 2026779 | g1792 | i0 | 57.5 | 1.95167286245353 | 87 | 35 | 95.9 | 2 | 2 | 259 | 96 | 181 | MAG94705.1 hypothetical protein [Planctomycetaceae bacterium] | diamond | 525 | 105 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 31950627 | 31950627 | PRJNA801875_P_NODE_277_length_867_cov_9.108173_g197_i0 | PRJNA801875 | 277 | 867 | 9.108173 | 78.96785991 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 72.8 | 2.93e-10 | NR | NOT01860.1 | 2052180 | g197 | i0 | 29.1 | 0.688581314878893 | 199 | 133 | 67.5 | 6 | 864 | 280 | 27 | 221 | NOT01860.1 DUF4215 domain-containing protein [Phycisphaerales bacterium] | diamond | 597 | 72.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 32330758 | 32330758 | PRJNA801875_P_NODE_3639_length_172_cov_1.204380_g3536_i0 | PRJNA801875 | 3639 | 172 | 1.20438 | 2.0715336 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 47 | 4.47e-4 | NR | HYE61306.1 | 2052180 | g3536 | i0 | 44.6 | 0.976744186046512 | 56 | 30 | 97.7 | 1 | 3 | 170 | 618 | 672 | HYE61306.1 hypothetical protein [Phycisphaerales bacterium] | diamond | 168 | 47 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 32466068 | 32466068 | PRJNA801875_P_NODE_1779_length_280_cov_3.640816_g1676_i0 | PRJNA801875 | 1779 | 280 | 3.640816 | 10.1942848 | Planctomycetia | 203683 | Bacteria | Bacteria | 47.8 | 9.87e-4 | NR | MFM7518713.1 | 117 | g1676 | i0 | 45.6 | 3.38571428571429 | 79 | 39 | 83.6 | 2 | 249 | 16 | 243 | 318 | MFM7518713.1 hypothetical protein [Pirellula sp.] | diamond | 948 | 47.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Pirellula | Pirellula sp. | |
| 32520526 | 32520526 | PRJNA801875_P_NODE_1059_length_396_cov_2.662050_g956_i0 | PRJNA801875 | 1059 | 396 | 2.66205 | 10.541718 | Planctomycetaceae bacterium | 2026779 | Bacteria | Bacteria | 75.5 | 7.64e-13 | NR | MEZ6056578.1 | 2026779 | g956 | i0 | 43.4 | 0.856060606060606 | 113 | 63 | 84.8 | 1 | 380 | 45 | 1334 | 1446 | MEZ6056578.1 Ig-like domain-containing protein [Planctomycetaceae bacterium] | diamond | 339 | 75.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;