RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA801875", tax_clade = "Opisthokonta" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA801875 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18652555 18652555 PRJNA801875_P_NODE_3895_length_166_cov_1.206107_g3792_i0 PRJNA801875 3895 166 1.206107 2.00213762 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 62.1 2.31e-5   NTclustered gi|687328761|emb|LK788226.1| 57078 g3792 i0 87.037 0.325301204819277 54 7 33 0 46 99 193 246 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0041535 blastn 54 62.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
31254788 31254788 PRJNA801875_P_NODE_1815_length_277_cov_2.223140_g1712_i0 PRJNA801875 1815 277 2.22314 6.1580978 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 46.2 0.00334   NR TNN19701.1 6182 g1712 i0 39.5 1.53790613718412 86 51 92.1 1 260 6 297 382 TNN19701.1 pre-rRNA processing protein [Schistosoma japonicum] diamond 426 46.2 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
31792331 31792331 PRJNA801875_P_NODE_4337_length_157_cov_1.286885_g4234_i0 PRJNA801875 4337 157 1.286885 2.02040945 Paragonimus kellicotti 100269 Platyhelminthes Platyhelminthes 66.6 9.9e-12   NR KAF6775990.1 100269 g4234 i0 56.9 2.92356687898089 51 22 97.5 0 155 3 19 69 KAF6775990.1 hypothetical protein AHF37_04925 [Paragonimus kellicotti] diamond 459 66.6 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Troglotrematidae Paragonimus Paragonimus kellicotti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;