RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA801875" and tax_clade = "Metamonada"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Metamonada · 5 ✖

bioproject 1

  • PRJNA801875 · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2076882 2076882 PRJNA801875_P_NODE_2722_length_205_cov_1.623529_g2619_i0 PRJNA801875 2722 205 1.623529 3.32823445 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.018   NTclustered gi|2794937463|ref|XM_067873916.1| 2049356 g2619 i0 100 0.273170731707317 28 0 14 0 51 78 6203 6230 Monocercomonoides exilis uncharacterized protein (MONOS_3889), partial mRNA blastn 56 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
26769269 26769269 PRJNA801875_P_NODE_4321_length_157_cov_1.893443_g4218_i0 PRJNA801875 4321 157 1.893443 2.97270551 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 86.7 1.91e-18   NR KAJ4457465.1 342808 g4218 i0 83.3 1.81528662420382 48 8 91.7 0 148 5 202 249 KAJ4457465.1 putative 40S ribosomal protein S17-B [Paratrimastix pyriformis] diamond 285 86.7 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
28380587 28380587 PRJNA801875_P_NODE_1506_length_314_cov_1.630824_g1403_i0 PRJNA801875 1506 314 1.630824 5.12078736 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 132 4.19e-37   NR KAJ3425923.1 1746091 g1403 i0 67.8 7.60509554140127 90 29 86 0 4 273 47 136 KAJ3425923.1 40S ribosomal protein S11 [Anaeramoeba flamelloides] diamond 2388 132 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
29359493 29359493 PRJNA801875_P_NODE_3169_length_186_cov_1.304636_g3066_i0 PRJNA801875 3169 186 1.304636 2.42662296 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 42.7 0.0183   NR KAJ3449789.1 1746091 g3066 i0 42.6 1.93548387096774 61 33 98.4 1 4 186 574 632 KAJ3449789.1 alpha-actinin sarcomeric-like protein [Anaeramoeba flamelloides] diamond 360 42.7 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
31191249 31191249 PRJNA801875_P_NODE_4735_length_151_cov_1.008621_g4632_i0 PRJNA801875 4735 151 1.008621 1.52301771 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 63.9 3.16e-10   NR KAJ3441208.1 1746091 g4632 i0 59.6 2.80132450331126 47 19 93.4 0 143 3 154 200 KAJ3441208.1 guanine nucleotide-binding protein g(o) subunit alpha [Anaeramoeba flamelloides] diamond 423 63.9 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;