RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA801875", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA801875 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28579044 28579044 PRJNA801875_P_NODE_3807_length_168_cov_1.180451_g3704_i0 PRJNA801875 3807 168 1.180451 1.98315768 root 1 Root_unresolved Root_unresolved 53.5 9.74e-7   NR QLH54039.1 2447898 g3704 i0 60.5 1.58928571428571 43 17 76.8 0 9 137 96 138 QLH54039.1 MAG: Glutathione peroxidase [Candidatus Kapaibacterium sp.] diamond 267 53.9 0.992578849721707 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
32362320 32362320 PRJNA801875_P_NODE_3679_length_171_cov_1.125000_g3576_i0 PRJNA801875 3679 171 1.125 1.92375 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 43.1 0.0104   NR MDT3740480.1 2447898 g3576 i0 42.6 2.87719298245614 61 25 91.2 3 167 12 936 995 MDT3740480.1 SBBP repeat-containing protein [Candidatus Kapaibacterium sp.] diamond 492 43.1 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;