RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA800090" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA800090 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28128117 28128117 PRJNA800090_P_NODE_63085_length_436_cov_0.970027_g60901_i0 PRJNA800090 63085 436 0.970027 4.22931772 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 127 8.04e-31   NR MBY0275141.1 2838779 g60901 i0 44.5 1.06651376146789 155 73 97.7 4 435 10 306 460 MBY0275141.1 hypothetical protein [Candidatus Binatia bacterium] diamond 465 127 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31634273 31634273 PRJNA800090_P_NODE_69356_length_410_cov_2.023460_g67171_i0 PRJNA800090 69356 410 2.02346 8.296186 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 44.7 0.0458   NR MFN8545350.1 2838779 g67171 i0 63 0.197560975609756 27 10 19.8 0 3 83 426 452 MFN8545350.1 hypothetical protein [Candidatus Binatia bacterium] diamond 81 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;