RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA800090", tax_kingdom = "Fungi" and tax_phylum = "Olpidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Olpidiomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA800090 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16100586 16100586 PRJNA800090_P_NODE_176953_length_234_cov_0.884848_g174768_i0 PRJNA800090 176953 234 0.884848 2.07054432 Eukaryota 2759 Fungi Fungi 127 4.68e-32   NR BAL15351.1 278681 g174768 i0 81.8 1.97435897435897 77 14 98.7 0 3 233 483 559 BAL15351.1 translation elongation factor 2, partial [Olpidium bornovanus] diamond 462 127 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
16100869 16100869 PRJNA800090_P_NODE_190633_length_229_cov_0.900000_g188448_i0 PRJNA800090 190633 229 0.9 2.061 Olpidium bornovanus 278681 Fungi Fungi 106 9.75e-25   NR KAG5458192.1 278681 g188448 i0 69.3 2.94759825327511 75 23 98.3 0 3 227 507 581 KAG5458192.1 MAG: P-loop containing nucleoside triphosphate hydrolase protein, partial [Olpidium bornovanus] diamond 675 106 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
28664789 28664789 PRJNA800090_P_NODE_189827_length_229_cov_0.912500_g187642_i0 PRJNA800090 189827 229 0.9125 2.089625 Olpidium bornovanus 278681 Fungi Fungi 68.2 3.48e-11   NR KAG5462925.1 278681 g187642 i0 45.8 0.77292576419214 59 32 77.3 0 2 178 833 891 KAG5462925.1 MAG: hypothetical protein BJ554DRAFT_2840, partial [Olpidium bornovanus] diamond 177 68.2 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;