RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJNA800053", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 12 ✖

tax_phylum 1

  • Kitrinoviricota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA800053 · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3347210 3347210 PRJNA800053_P_NODE_16603_length_255_cov_1.637363_g16439_i0 PRJNA800053 16603 255 1.637363 4.17527565 Cucumovirus CMV 3428131 Viruses Viruses 453 5.44e-123   NTclustered gi|2594385161|gb|OL695912.1| 12305 g16439 i0 99.206 96.9372549019608 252 1 98 1 4 254 129 380 Cucumber mosaic virus isolate ZARCu coat protein gene, complete cds blastn 24719 453 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Cucumovirus Cucumovirus CMV
7174499 7174499 PRJNA800053_P_NODE_15766_length_260_cov_2.326203_g15602_i0 PRJNA800053 15766 260 2.326203 6.0481278 Tolivirales sp. 2809914 Viruses Viruses 468 1.99e-127   NTclustered gi|2647549764|gb|OR843730.1| 2809914 g15602 i0 99.609 0.984615384615385 256 1 98 0 4 259 646 901 Tolivirales sp. strain MR233-17E/3903 polyprotein, hypothetical protein, and structural protein genes, complete cds blastn 256 468 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
21198689 21198689 PRJNA800053_P_NODE_3537_length_470_cov_3.866499_g3374_i0 PRJNA800053 3537 470 3.866499 18.1725453 Tolivirales sp. 2809914 Viruses Viruses 227 7.729999999999999e-66   NR WRQ65272.1 2809914 g3374 i0 66.5 0.98936170212766 155 52 98.9 0 467 3 98 252 WRQ65272.1 polyprotein [Tolivirales sp.] diamond 465 227 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
28412181 28412181 PRJNA800053_P_NODE_4586_length_420_cov_3.293948_g4423_i0 PRJNA800053 4586 420 3.293948 13.8345816 Tolivirales sp. 2809914 Viruses Viruses 197 1.6199999999999995e-55   NR WRQ65272.1 2809914 g4423 i0 68.8 0.985714285714286 138 32 98.6 1 5 418 451 577 WRQ65272.1 polyprotein [Tolivirales sp.] diamond 414 197 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
28696460 28696460 PRJNA800053_P_NODE_7827_length_339_cov_2.563910_g7663_i0 PRJNA800053 7827 339 2.56391 8.6916549 Skomarfal virus 4 3063437 Viruses Viruses 53.1 2.51e-5   NR WPR18392.1 3063109 g7663 i0 34.5 0.743362831858407 84 54 73.5 1 250 2 546 629 WPR18392.1 MAG: hypothetical protein, partial [Skomarfal virus 40] diamond 252 53.1 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Skomarfal virus 40
29517049 29517049 PRJNA800053_P_NODE_25230_length_204_cov_5.656489_g25066_i0 PRJNA800053 25230 204 5.656489 11.53923756 Tolivirales sp. 2809914 Viruses Viruses 105 1.07e-24   NR WRQ64995.1 2809914 g25066 i0 70.3 1.88235294117647 64 19 94.1 0 12 203 1 64 WRQ64995.1 structural protein [Tolivirales sp.] diamond 384 105 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
29737950 29737950 PRJNA800053_P_NODE_16710_length_254_cov_2.817680_g16546_i0 PRJNA800053 16710 254 2.81768 7.1569072 Tolivirales sp. 2809914 Viruses Viruses 117 1.72e-28   NR WRQ65272.1 2809914 g16546 i0 66.3 0.980314960629921 83 24 98 1 5 253 249 327 WRQ65272.1 polyprotein [Tolivirales sp.] diamond 249 117 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
29864496 29864496 PRJNA800053_P_NODE_12591_length_282_cov_4.110048_g12427_i0 PRJNA800053 12591 282 4.110048 11.59033536 Tolivirales sp. 2809914 Viruses Viruses 120 2.95e-29   NR WRQ65272.1 2809914 g12427 i0 59.1 0.98936170212766 93 38 98.9 0 4 282 702 794 WRQ65272.1 polyprotein [Tolivirales sp.] diamond 279 120 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
30527933 30527933 PRJNA800053_P_NODE_10113_length_306_cov_2.841202_g9949_i0 PRJNA800053 10113 306 2.841202 8.69407812 Tolivirales sp. 2809914 Viruses Viruses 138 2.44e-35   NR WRQ65272.1 2809914 g9949 i0 65.3 0.990196078431373 101 35 99 0 304 2 902 1002 WRQ65272.1 polyprotein [Tolivirales sp.] diamond 303 138 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
31065371 31065371 PRJNA800053_P_NODE_11635_length_290_cov_1.783410_g11471_i0 PRJNA800053 11635 290 1.78341 5.171889 Nodamuvirales sp. 2809606 Viruses Viruses 68.2 7.6e-11   NR XKB76524.1 2809606 g11471 i0 41.9 0.76551724137931 74 43 76.6 0 4 225 850 923 XKB76524.1 MAG: methyltransferase, partial [Nodamuvirales sp.] diamond 222 68.2 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales     Nodamuvirales sp.
32330678 32330678 PRJNA800053_P_NODE_9159_length_318_cov_2.693878_g8995_i0 PRJNA800053 9159 318 2.693878 8.56653204 Tolivirales sp. 2809914 Viruses Viruses 76.3 1.35e-13   NR WRQ65316.1 2809914 g8995 i0 40 0.990566037735849 105 63 99.1 0 316 2 48 152 WRQ65316.1 structural protein [Tolivirales sp.] diamond 315 76.3 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
32362248 32362248 PRJNA800053_P_NODE_24259_length_237_cov_3.408537_g24095_i0 PRJNA800053 24259 237 3.408537 8.07823269 Tolivirales sp. 2809914 Viruses Viruses 102 4.64e-23   NR WRQ65272.1 2809914 g24095 i0 64 0.949367088607595 75 27 94.9 0 5 229 565 639 WRQ65272.1 polyprotein [Tolivirales sp.] diamond 225 102 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;