RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

8 rows where bioproject = "PRJNA800053" and tax_phylum = "Candidatus Peregrinibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Peregrinibacteriota · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA800053 · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8449216 8449216 PRJNA800053_P_NODE_13047_length_279_cov_1.888350_g12883_i0 PRJNA800053 13047 279 1.88835 5.2684965 Candidatus Peribacter riflensis 1735162 Bacteria Bacteria 243 1.42e-59   NTclustered gi|946529367|gb|CP013062.1| 1735162 g12883 i0 82.609 162.591397849462 276 46 99 1 1 276 1195102 1194829 MAG: Candidatus Peribacter riflensis, complete genome blastn 45363 243 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria Candidatus Peribacterales   Candidatus Peribacter Candidatus Peribacter riflensis
8449255 8449255 PRJNA800053_P_NODE_17707_length_251_cov_0.865169_g17543_i0 PRJNA800053 17707 251 0.865169 2.17157419 Candidatus Peribacteraceae bacterium 2735830 Bacteria Bacteria 135 7.64e-36   NR MBP9750546.1 2735830 g17543 i0 95.2 0.752988047808765 63 3 75.3 0 193 5 270 332 MBP9750546.1 histidine--tRNA ligase [Candidatus Peribacteraceae bacterium] diamond 189 135 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria Candidatus Peribacterales     Candidatus Peribacteraceae bacterium
21198571 21198571 PRJNA800053_P_NODE_12597_length_282_cov_3.430622_g12433_i0 PRJNA800053 12597 282 3.430622 9.67435404 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 248 3.09e-61   NTclustered gi|2225492643|gb|CP082927.1| 2053688 g12433 i0 83.577 71.0744680851064 274 35 95 9 12 279 192631 192362 MAG: Candidatus Peribacteria bacterium isolate LakeFargette_0920_ALND_MAG_52_24 chromosome, complete genome blastn 20043 248 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
27085750 27085750 PRJNA800053_P_NODE_19982_length_247_cov_0.885057_g19818_i0 PRJNA800053 19982 247 0.885057 2.18609079 Candidatus Peregrinibacteria bacterium 2030811 Bacteria Bacteria 74.7 2.11e-13   NR MBT4585878.1 2030811 g19818 i0 46.2 2.00404858299595 78 41 93.5 1 242 12 80 157 MBT4585878.1 hypothetical protein [Candidatus Peregrinibacteria bacterium] diamond 495 74.7 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota         Candidatus Peregrinibacteria bacterium
27117073 27117073 PRJNA800053_P_NODE_22722_length_243_cov_0.905882_g22558_i0 PRJNA800053 22722 243 0.905882 2.20129326 Candidatus Peribacteraceae bacterium 2735830 Bacteria Bacteria 101 8.27e-25   NR MEQ1849721.1 2735830 g22558 i0 61 1.85185185185185 77 30 95.1 0 8 238 84 160 MEQ1849721.1 DsbA family protein [Candidatus Peribacteraceae bacterium] diamond 450 101 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria Candidatus Peribacterales     Candidatus Peribacteraceae bacterium
27307077 27307077 PRJNA800053_P_NODE_23883_length_241_cov_0.916667_g23719_i0 PRJNA800053 23883 241 0.916667 2.20916747 Candidatus Peribacteraceae bacterium 2735830 Bacteria Bacteria 95.5 7.26e-21   NR HLD71087.1 2735830 g23719 i0 50.6 0.95850622406639 77 38 95.9 0 239 9 220 296 HLD71087.1 glycosyltransferase family 4 protein [Candidatus Peribacteraceae bacterium] diamond 231 95.5 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria Candidatus Peribacterales     Candidatus Peribacteraceae bacterium
29201575 29201575 PRJNA800053_P_NODE_16169_length_258_cov_1.405405_g16005_i0 PRJNA800053 16169 258 1.405405 3.6259449 Candidatus Peribacteraceae bacterium 2735830 Bacteria Bacteria 88.6 1.9e-18   NR NOS67210.1 2735830 g16005 i0 51.1 2.13953488372093 92 37 97.7 2 254 3 178 269 NOS67210.1 N-acetyl sugar amidotransferase [Candidatus Peribacteraceae bacterium] diamond 552 88.6 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria Candidatus Peribacterales     Candidatus Peribacteraceae bacterium
30622628 30622628 PRJNA800053_P_NODE_23293_length_242_cov_0.911243_g23129_i0 PRJNA800053 23293 242 0.911243 2.20520806 Candidatus Peribacteraceae bacterium 2735830 Bacteria Bacteria 94.4 2.53e-20   NR MBP9750592.1 2735830 g23129 i0 51.9 1.00413223140496 81 37 97.9 1 239 3 279 359 MBP9750592.1 hypothetical protein [Candidatus Peribacteraceae bacterium] diamond 243 94.4 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria Candidatus Peribacterales     Candidatus Peribacteraceae bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;