contig_metadata
11 rows where bioproject = "PRJNA800053", tax_kingdom = "Pseudomonadati" and tax_phylum = "Nitrospirota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5899835 | 5899835 | PRJNA800053_P_NODE_6805_length_359_cov_2.374126_g6641_i0 | PRJNA800053 | 6805 | 359 | 2.374126 | 8.52311234 | root | 1 | Root_unresolved | Root_unresolved | 140 | 1.91e-38 | NR | HAN48980.1 | 70125 | g6641 | i0 | 81.8 | 5.79108635097493 | 77 | 14 | 64.3 | 0 | 5 | 235 | 202 | 278 | HAN48980.1 phage capsid protein [Nitrospira sp.] | diamond | 2079 | 140 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 11000113 | 11000113 | PRJNA800053_P_NODE_20929_length_245_cov_1.627907_g20765_i0 | PRJNA800053 | 20929 | 245 | 1.627907 | 3.98837215 | Nitrospira sp. KM1 | 1936990 | Bacteria | Bacteria | 372 | 1.49e-98 | NTclustered | gi|1808878785|dbj|AP022671.1| | 1936990 | g20765 | i0 | 94.583 | 92.330612244898 | 240 | 13 | 98 | 0 | 4 | 243 | 4207905 | 4208144 | Nitrospira sp. KM1 DNA, complete genome | blastn | 22621 | 372 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. KM1 | ||
| 27117072 | 27117072 | PRJNA800053_P_NODE_21562_length_244_cov_1.748538_g21398_i0 | PRJNA800053 | 21562 | 244 | 1.748538 | 4.26643272 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 69.7 | 1.17e-11 | NR | HNG01977.1 | 70125 | g21398 | i0 | 49.3 | 0.922131147540984 | 75 | 35 | 91 | 2 | 1 | 222 | 368 | 440 | HNG01977.1 tetratricopeptide repeat-containing glycosyltransferase family protein [Nitrospira sp.] | diamond | 225 | 69.7 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 27243684 | 27243684 | PRJNA800053_P_NODE_12083_length_286_cov_3.413146_g11919_i0 | PRJNA800053 | 12083 | 286 | 3.413146 | 9.76159756 | Candidatus Magnetobacterium casense | 1455061 | Bacteria | Bacteria | 72.4 | 5.06e-13 | NR | WP_218254002.1 | 1455061 | g11919 | i0 | 40 | 0.786713286713287 | 75 | 43 | 78.7 | 1 | 3 | 227 | 153 | 225 | WP_218254002.1 hypothetical protein [Candidatus Magnetobacterium casense] | diamond | 225 | 72.4 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Thermodesulfovibrionia | Thermodesulfovibrionales | Candidatus Magnetobacteriaceae | Candidatus Magnetobacterium | Candidatus Magnetobacterium casense | ||
| 27243693 | 27243693 | PRJNA800053_P_NODE_8703_length_325_cov_1.817460_g8539_i0 | PRJNA800053 | 8703 | 325 | 1.81746 | 5.906745 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 189 | 4.529999999999999e-55 | NR | HMV57842.1 | 70125 | g8539 | i0 | 84.1 | 0.987692307692308 | 107 | 17 | 98.8 | 0 | 3 | 323 | 355 | 461 | HMV57842.1 hypothetical protein [Nitrospira sp.] | diamond | 321 | 189 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 29391024 | 29391024 | PRJNA800053_P_NODE_14209_length_271_cov_1.227273_g14045_i0 | PRJNA800053 | 14209 | 271 | 1.227273 | 3.32590983 | Nitrospira sp. BLG_1 | 3395883 | Bacteria | Bacteria | 166 | 1.41e-49 | NR | WP_413933349.1 | 3395883 | g14045 | i0 | 96.6 | 0.985239852398524 | 89 | 3 | 98.5 | 0 | 268 | 2 | 18 | 106 | WP_413933349.1 hypothetical protein [Nitrospira sp. BLG_1] | diamond | 267 | 166 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. BLG_1 | ||
| 30402080 | 30402080 | PRJNA800053_P_NODE_12873_length_280_cov_2.859903_g12709_i0 | PRJNA800053 | 12873 | 280 | 2.859903 | 8.0077284 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 175 | 8.94e-49 | NR | MBK8380046.1 | 70125 | g12709 | i0 | 96.7 | 0.985714285714286 | 92 | 3 | 98.6 | 0 | 278 | 3 | 611 | 702 | MBK8380046.1 hypothetical protein [Nitrospira sp.] | diamond | 276 | 175 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 30875545 | 30875545 | PRJNA800053_P_NODE_16514_length_256_cov_1.054645_g16350_i0 | PRJNA800053 | 16514 | 256 | 1.054645 | 2.6998912 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 61.6 | 9.61e-9 | NR | MCI0526363.1 | 70125 | g16350 | i0 | 50.7 | 0.83203125 | 71 | 26 | 72.7 | 3 | 33 | 218 | 112 | 182 | MCI0526363.1 DNA polymerase [Nitrospira sp.] | diamond | 213 | 61.6 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 32045652 | 32045652 | PRJNA800053_P_NODE_11918_length_288_cov_1.111628_g11754_i0 | PRJNA800053 | 11918 | 288 | 1.111628 | 3.20148864 | Nitrospiraceae bacterium | 2026770 | Bacteria | Bacteria | 93.6 | 8.73e-20 | NR | HBR22855.1 | 2026770 | g11754 | i0 | 51.6 | 0.96875 | 93 | 45 | 96.9 | 0 | 7 | 285 | 146 | 238 | HBR22855.1 hypothetical protein [Nitrospiraceae bacterium] | diamond | 279 | 93.6 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospiraceae bacterium | |||
| 32244711 | 32244711 | PRJNA800053_P_NODE_20858_length_245_cov_2.680233_g20694_i0 | PRJNA800053 | 20858 | 245 | 2.680233 | 6.56657085 | Cyanobacteriota/Melainabacteria group | 1798711 | Bacteria | Bacteria | 89 | 7.14e-19 | NR | KPJ99589.1 | 1704025 | g20694 | i0 | 53.2 | 2.82857142857143 | 77 | 34 | 94.3 | 1 | 234 | 4 | 247 | 321 | KPJ99589.1 MAG: sugar dehydratase [Nitrospira bacterium SG8_35_4] | diamond | 693 | 89.4 | 0.995525727069351 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospira bacterium SG8_35_4 | |||||
| 32803686 | 32803686 | PRJNA800053_P_NODE_19740_length_247_cov_1.517241_g19576_i0 | PRJNA800053 | 19740 | 247 | 1.517241 | 3.74758527 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 109 | 8.4e-26 | NR | TAJ08711.1 | 2026887 | g19576 | i0 | 71.3 | 0.97165991902834 | 80 | 23 | 97.2 | 0 | 245 | 6 | 100 | 179 | TAJ08711.1 MAG: flagellar biosynthesis protein FlhF [Nitrospirota bacterium] | diamond | 240 | 109 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;