RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA800053", tax_kingdom = "Fungi" and tax_phylum = "Mucoromycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA800053 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7174565 7174565 PRJNA800053_P_NODE_22866_length_242_cov_1.538462_g22702_i0 PRJNA800053 22866 242 1.538462 3.72307804 Rhizophagus irregularis 588596 Fungi Fungi 54.7 0.006   NTclustered gi|2749792877|ref|XM_066144197.1| 588596 g22702 i0 100 0.119834710743802 29 0 12 0 73 101 438 466 Rhizophagus irregularis uncharacterized protein (OCT59_029479), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis
28001799 28001799 PRJNA800053_P_NODE_20005_length_247_cov_0.885057_g19841_i0 PRJNA800053 20005 247 0.885057 2.18609079 Rhizophagus irregularis 588596 Fungi Fungi 43.1 0.027   NR CAB4393707.1 588596 g19841 i0 37.5 0.777327935222672 64 39 76.5 1 241 53 120 183 CAB4393707.1 unnamed protein product [Rhizophagus irregularis] diamond 192 43.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;