RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA800053", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA800053 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13549750 13549750 PRJNA800053_P_NODE_14071_length_272_cov_1.301508_g13907_i0 PRJNA800053 14071 272 1.301508 3.54010176 Rosculus incognitus 2231162 SAR_Eukaryotes SAR_Eukaryotes 388 1.67e-103   NTclustered gi|1402550483|gb|MH488769.1| 2231162 g13907 i0 98.198 62.6580882352941 222 4 82 0 48 269 1583 1362 Rosculus incognitus isolate ATCC 50577 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 17043 388 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus incognitus
19922979 19922979 PRJNA800053_P_NODE_13536_length_276_cov_1.142857_g13372_i0 PRJNA800053 13536 276 1.142857 3.15428532 Rosculus incognitus 2231162 SAR_Eukaryotes SAR_Eukaryotes 412 1.0099999999999997e-110   NTclustered gi|1402550483|gb|MH488769.1| 2231162 g13372 i0 93.818 61.1050724637681 275 15 99 2 2 276 1706 1978 Rosculus incognitus isolate ATCC 50577 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 16865 412 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus incognitus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;