contig_metadata
21 rows where bioproject = "PRJNA800053", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3347199 | 3347199 | PRJNA800053_P_NODE_14103_length_272_cov_1.070352_g13939_i0 | PRJNA800053 | 14103 | 272 | 1.070352 | 2.91135744 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 307 | 4.8200000000000006e-79 | NTclustered | gi|2874253768|emb|OY969715.1| | 412056 | g13939 | i0 | 87.361 | 219.202205882353 | 269 | 32 | 99 | 2 | 1 | 269 | 913079 | 913345 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD01916.bin.1.1 genome assembly, chromosome: 1 | blastn | 59623 | 307 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 8873035 | 8873035 | PRJNA800053_P_NODE_14167_length_271_cov_1.555556_g14003_i0 | PRJNA800053 | 14167 | 271 | 1.555556 | 4.21555676 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 96.3 | 1.4e-21 | NR | MBC8010549.1 | 2006848 | g14003 | i0 | 97.9 | 0.531365313653137 | 48 | 1 | 53.1 | 0 | 269 | 126 | 268 | 315 | MBC8010549.1 phosphatase [Opitutaceae bacterium] | diamond | 144 | 96.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 25022828 | 25022828 | PRJNA800053_P_NODE_21160_length_245_cov_0.895349_g20996_i0 | PRJNA800053 | 21160 | 245 | 0.895349 | 2.19360505 | Luteolibacter sp. Populi | 3230487 | Bacteria | Bacteria | 263 | 9.38e-66 | NTclustered | gi|2774618348|gb|CP161812.1| | 3230487 | g20996 | i0 | 86.122 | 2.43265306122449 | 245 | 32 | 99 | 2 | 2 | 245 | 1012623 | 1012866 | Luteolibacter sp. Populi chromosome, complete genome | blastn | 596 | 263 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. Populi | |
| 26832589 | 26832589 | PRJNA800053_P_NODE_16281_length_257_cov_1.663043_g16117_i0 | PRJNA800053 | 16281 | 257 | 1.663043 | 4.27402051 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 108 | 7.079999999999999e-28 | NR | MES2597201.1 | 2026799 | g16117 | i0 | 60.7 | 1.9727626459144 | 84 | 33 | 98.1 | 0 | 3 | 254 | 59 | 142 | MES2597201.1 CHAP domain-containing protein [Verrucomicrobiota bacterium] | diamond | 507 | 108 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 26864528 | 26864528 | PRJNA800053_P_NODE_12821_length_281_cov_1.197115_g12657_i0 | PRJNA800053 | 12821 | 281 | 1.197115 | 3.36389315 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 64.7 | 8.9e-10 | NR | MEO7933197.1 | 2201154 | g12657 | i0 | 48.8 | 0.875444839857651 | 82 | 42 | 87.5 | 0 | 12 | 257 | 53 | 134 | MEO7933197.1 hypothetical protein [Chthoniobacterales bacterium] | diamond | 246 | 64.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 26927499 | 26927499 | PRJNA800053_P_NODE_23482_length_241_cov_1.678571_g23318_i0 | PRJNA800053 | 23482 | 241 | 1.678571 | 4.04535611 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 132 | 7.489999999999999e-37 | NR | MDB6136024.1 | 2026801 | g23318 | i0 | 74.4 | 5.78838174273859 | 78 | 20 | 97.1 | 0 | 6 | 239 | 65 | 142 | MDB6136024.1 ErfK/YbiS/YcfS/YnhG family protein [Verrucomicrobiales bacterium] | diamond | 1395 | 132 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 27370460 | 27370460 | PRJNA800053_P_NODE_12803_length_281_cov_1.302885_g12639_i0 | PRJNA800053 | 12803 | 281 | 1.302885 | 3.66110685 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 77.8 | 2.59e-15 | NR | HEY4281466.1 | 2201154 | g12639 | i0 | 56 | 0.896797153024911 | 84 | 31 | 83.3 | 3 | 2 | 235 | 86 | 169 | HEY4281466.1 hypothetical protein [Chthoniobacterales bacterium] | diamond | 252 | 77.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 27591390 | 27591390 | PRJNA800053_P_NODE_22344_length_243_cov_0.905882_g22180_i0 | PRJNA800053 | 22344 | 243 | 0.905882 | 2.20129326 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 47.8 | 5.52e-5 | NR | MDP3072361.1 | 2006848 | g22180 | i0 | 76.9 | 0.320987654320988 | 26 | 6 | 32.1 | 0 | 240 | 163 | 43 | 68 | MDP3072361.1 helix-turn-helix domain-containing protein [Opitutaceae bacterium] | diamond | 78 | 47.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 28664756 | 28664756 | PRJNA800053_P_NODE_18247_length_250_cov_0.870056_g18083_i0 | PRJNA800053 | 18247 | 250 | 0.870056 | 2.17514 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 80.1 | 1.36e-17 | NR | MBM3877705.1 | 2026799 | g18083 | i0 | 62.3 | 0.636 | 53 | 20 | 63.6 | 0 | 86 | 244 | 3 | 55 | MBM3877705.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 159 | 80.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 28989640 | 28989640 | PRJNA800053_P_NODE_17928_length_250_cov_1.242938_g17764_i0 | PRJNA800053 | 17928 | 250 | 1.242938 | 3.107345 | root | 1 | Root_unresolved | Root_unresolved | 53.5 | 6.05e-6 | NR | HEU5080702.1 | 2006848 | g17764 | i0 | 61 | 1.272 | 41 | 16 | 49.2 | 0 | 3 | 125 | 402 | 442 | HEU5080702.1 hypothetical protein [Opitutaceae bacterium] | diamond | 318 | 53.9 | 0.992578849721707 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 29264407 | 29264407 | PRJNA800053_P_NODE_19529_length_248_cov_0.880000_g19365_i0 | PRJNA800053 | 19529 | 248 | 0.88 | 2.1824 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 67 | 1.53e-12 | NR | MDQ5978806.1 | 2026799 | g19365 | i0 | 55.9 | 0.82258064516129 | 68 | 30 | 82.3 | 0 | 211 | 8 | 1 | 68 | MDQ5978806.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 204 | 67 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 29485361 | 29485361 | PRJNA800053_P_NODE_20870_length_245_cov_2.343023_g20706_i0 | PRJNA800053 | 20870 | 245 | 2.343023 | 5.74040635 | Chthoniobacteraceae bacterium | 2811408 | Bacteria | Bacteria | 53.1 | 7.76e-6 | NR | MCX8510204.1 | 2811408 | g20706 | i0 | 35 | 0.979591836734694 | 80 | 46 | 98 | 3 | 3 | 242 | 158 | 231 | MCX8510204.1 hypothetical protein [Chthoniobacteraceae bacterium] | diamond | 240 | 53.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacteraceae bacterium | ||
| 29674722 | 29674722 | PRJNA800053_P_NODE_17130_length_252_cov_1.351955_g16966_i0 | PRJNA800053 | 17130 | 252 | 1.351955 | 3.4069266 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 65.9 | 3e-11 | NR | HRI13986.1 | 2026799 | g16966 | i0 | 45.1 | 1.95238095238095 | 82 | 45 | 97.6 | 0 | 2 | 247 | 33 | 114 | HRI13986.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 492 | 65.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 30685838 | 30685838 | PRJNA800053_P_NODE_18933_length_249_cov_0.875000_g18769_i0 | PRJNA800053 | 18933 | 249 | 0.875 | 2.17875 | Prosthecobacter sp. | 1965333 | Bacteria | Bacteria | 107 | 2.86e-25 | NR | MDP1591951.1 | 1965333 | g18769 | i0 | 63.4 | 0.987951807228916 | 82 | 30 | 98.8 | 0 | 3 | 248 | 243 | 324 | MDP1591951.1 tRNA lysidine(34) synthetase TilS [Prosthecobacter sp.] | diamond | 246 | 107 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter sp. | |
| 30875547 | 30875547 | PRJNA800053_P_NODE_20154_length_247_cov_0.885057_g19990_i0 | PRJNA800053 | 20154 | 247 | 0.885057 | 2.18609079 | Chthoniobacteraceae bacterium | 2811408 | Bacteria | Bacteria | 83.6 | 4.44e-17 | NR | HWL54283.1 | 2811408 | g19990 | i0 | 52.7 | 0.898785425101215 | 74 | 35 | 89.9 | 0 | 17 | 238 | 82 | 155 | HWL54283.1 hypothetical protein [Chthoniobacteraceae bacterium] | diamond | 222 | 83.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacteraceae bacterium | ||
| 31010825 | 31010825 | PRJNA800053_P_NODE_12654_length_282_cov_1.440191_g12490_i0 | PRJNA800053 | 12654 | 282 | 1.440191 | 4.06133862 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 115 | 1.2e-28 | NR | WP_395735065.1 | 1965333 | g12490 | i0 | 56 | 1.93617021276596 | 91 | 40 | 96.8 | 0 | 275 | 3 | 107 | 197 | WP_395735065.1 integron integrase [Prosthecobacter sp.] | diamond | 546 | 115 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter sp. | |
| 31136981 | 31136981 | PRJNA800053_P_NODE_20695_length_246_cov_0.890173_g20531_i0 | PRJNA800053 | 20695 | 246 | 0.890173 | 2.18982558 | PVC group | 1783257 | Bacteria | Bacteria | 73.2 | 7.34e-13 | NR | MFO1514118.1 | 2026799 | g20531 | i0 | 57.1 | 2.64634146341463 | 70 | 29 | 84.1 | 1 | 220 | 14 | 839 | 908 | MFO1514118.1 DUF1349 domain-containing protein [Verrucomicrobiota bacterium] | diamond | 651 | 73.9 | 0.990527740189445 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 31665825 | 31665825 | PRJNA800053_P_NODE_22877_length_242_cov_1.479290_g22713_i0 | PRJNA800053 | 22877 | 242 | 1.47929 | 3.5798818 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 73.2 | 2.25e-13 | NR | MBI2948829.1 | 2026799 | g22713 | i0 | 85 | 0.991735537190083 | 40 | 6 | 49.6 | 0 | 239 | 120 | 158 | 197 | MBI2948829.1 sigma-70 family RNA polymerase sigma factor [Verrucomicrobiota bacterium] | diamond | 240 | 73.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 31982162 | 31982162 | PRJNA800053_P_NODE_12918_length_280_cov_1.705314_g12754_i0 | PRJNA800053 | 12918 | 280 | 1.705314 | 4.7748792 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 89.4 | 6.37e-19 | NR | MBA3761753.1 | 2201154 | g12754 | i0 | 55.7 | 0.942857142857143 | 88 | 37 | 93.2 | 2 | 13 | 273 | 113 | 199 | MBA3761753.1 metallophosphoesterase [Chthoniobacterales bacterium] | diamond | 264 | 89.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 32371099 | 32371099 | PRJNA800053_P_NODE_18439_length_249_cov_1.732955_g18275_i0 | PRJNA800053 | 18439 | 249 | 1.732955 | 4.31505795 | Bacteria | 2 | Bacteria | Bacteria | 101 | 7.6e-23 | NR | PAW63515.1 | 1982332 | g18275 | i0 | 63.2 | 1.83132530120482 | 76 | 27 | 91.6 | 1 | 6 | 233 | 425 | 499 | PAW63515.1 MAG: kinase [Verrucomicrobiia bacterium Tous-C4TDCM] | diamond | 456 | 102 | 0.990196078431373 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium Tous-C4TDCM | ||||
| 32677588 | 32677588 | PRJNA800053_P_NODE_13380_length_277_cov_1.269608_g13216_i0 | PRJNA800053 | 13380 | 277 | 1.269608 | 3.51681416 | Luteolibacter sp. | 1962973 | Bacteria | Bacteria | 57.4 | 4.08e-7 | NR | MFT3992457.1 | 1962973 | g13216 | i0 | 42 | 1.70036101083032 | 81 | 41 | 81.2 | 3 | 231 | 7 | 572 | 652 | MFT3992457.1 hypothetical protein [Luteolibacter sp.] | diamond | 471 | 57.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;