RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA800053", tax_clade = "Opisthokonta" and tax_phylum = "Rotifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 9 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 9 ✖

bioproject 1

  • PRJNA800053 · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10148371 10148371 PRJNA800053_P_NODE_10788_length_298_cov_4.355556_g10624_i0 PRJNA800053 10788 298 4.355556 12.97955688 Ploima 84394 Rotifera other_Eukaryota 429 1.1e-115   NTclustered gi|72153738|gb|DQ089740.1| 204736 g10624 i0 93.174 96 293 19 98 1 4 295 1723 1431 Brachionus urceolaris 28S ribosomal RNA gene, partial sequence blastn 28608 429 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus urceolaris
16098678 16098678 PRJNA800053_P_NODE_12853_length_280_cov_10.120773_g12689_i0 PRJNA800053 12853 280 10.120773 28.3381644 Cephalodella forficula 360656 Rotifera other_Eukaryota 507 4.58e-139   NTclustered gi|83285081|gb|DQ297693.1| 360656 g12689 i0 99.639 98.925 277 1 99 0 4 280 606 882 Cephalodella forficula 18S ribosomal RNA gene, partial sequence blastn 27699 507 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Notommatidae Cephalodella Cephalodella forficula
16522718 16522718 PRJNA800053_P_NODE_16093_length_258_cov_2.135135_g15929_i0 PRJNA800053 16093 258 2.135135 5.5086483 Ploima 84394 Rotifera other_Eukaryota 296 9.83e-76   NTclustered gi|83285183|gb|DQ297730.1| 360655 g15929 i0 88.095 82.6162790697674 252 26 96 4 11 258 1 252 Ascomorpha ovalis 28S ribosomal RNA gene, partial sequence blastn 21315 298 0.993288590604027 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Gastropidae Ascomorpha Ascomorpha ovalis
25022767 25022767 PRJNA800053_P_NODE_13720_length_274_cov_7.019900_g13556_i0 PRJNA800053 13720 274 7.0199 19.234526 Trichotria tetractis 360708 Rotifera other_Eukaryota 270 6.379999999999999e-68   NTclustered gi|83285213|gb|DQ297760.1| 360708 g13556 i0 86.831 8.88321167883212 243 31 88 1 30 271 579 337 Trichotria tetractis 28S ribosomal RNA gene, partial sequence blastn 2434 270 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Trichotriidae Trichotria Trichotria tetractis
26673877 26673877 PRJNA800053_P_NODE_17481_length_251_cov_0.865169_g17317_i0 PRJNA800053 17481 251 0.865169 2.17157419 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 75.9 8.73e-14   NR CAF0748866.1 104777 g17317 i0 50.6 1.91235059760956 81 17 96.8 1 250 8 192 249 CAF0748866.1 unnamed protein product [Brachionus calyciflorus] diamond 480 75.9 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
28633315 28633315 PRJNA800053_P_NODE_23927_length_241_cov_0.916667_g23763_i0 PRJNA800053 23927 241 0.916667 2.20916747 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 95.1 1.36e-20   NR CAF0729025.1 104777 g23763 i0 58.8 0.995850622406639 80 31 98.3 2 240 4 785 863 CAF0729025.1 unnamed protein product [Brachionus calyciflorus] diamond 240 95.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
29737951 29737951 PRJNA800053_P_NODE_18730_length_249_cov_0.875000_g18566_i0 PRJNA800053 18730 249 0.875 2.17875 Brachionus plicatilis 10195 Rotifera other_Eukaryota 46.2 0.00232   NR RNA20803.1 10195 g18566 i0 50 0.457831325301205 38 15 45.8 1 134 247 100 133 RNA20803.1 sialin isoform X1 [Brachionus plicatilis] diamond 114 46.2 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
30148668 30148668 PRJNA800053_P_NODE_14232_length_271_cov_0.863636_g14068_i0 PRJNA800053 14232 271 0.863636 2.34045356 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 74.3 1.65e-14   NR CAF0930648.1 104777 g14068 i0 83.3 0.398523985239852 36 6 39.9 0 148 41 22 57 CAF0930648.1 unnamed protein product [Brachionus calyciflorus] diamond 108 74.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
30685841 30685841 PRJNA800053_P_NODE_24013_length_241_cov_0.916667_g23849_i0 PRJNA800053 24013 241 0.916667 2.20916747 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 127 1.24e-32   NR CAF0858820.1 104777 g23849 i0 77.5 0.883817427385892 71 16 88.4 0 227 15 269 339 CAF0858820.1 unnamed protein product [Brachionus calyciflorus] diamond 213 127 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;