RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA800053", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA800053 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6323871 6323871 PRJNA800053_P_NODE_15845_length_260_cov_1.347594_g15681_i0 PRJNA800053 15845 260 1.347594 3.5037444 Metazoa 33208 Cnidaria other_Eukaryota 54.7 0.007   NTclustered gi|2917940724|emb|OZ237563.1| 6108 g15681 i0 100 2.28461538461538 29 0 11 0 8 36 1563855 1563827 Anemonia sulcata genome assembly, chromosome: 9 blastn 594 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
32645980 32645980 PRJNA800053_P_NODE_17400_length_251_cov_0.865169_g17236_i0 PRJNA800053 17400 251 0.865169 2.17157419 Exaiptasia diaphana 2652724 Cnidaria other_Eukaryota 54.7 2.5e-6   NR KXJ22819.1 2652724 g17236 i0 43.5 2.199203187251 62 33 71.7 1 220 41 83 144 KXJ22819.1 Testis-specific serine/threonine-protein kinase 1 [Exaiptasia diaphana] diamond 552 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;