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contig_metadata

11 rows where bioproject = "PRJNA800053", tax_clade = "Discoba" and tax_phylum = "Heterolobosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 11 ✖

tax_clade 1

  • Discoba · 11 ✖

bioproject 1

  • PRJNA800053 · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5048029 5048029 PRJNA800053_P_NODE_2484_length_548_cov_7.233684_g2326_i0 PRJNA800053 2484 548 7.233684 39.64058832 Naegleria 5761 Heterolobosea other_Eukaryota 966 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g2326 i0 98.713 94.1532846715328 544 7 99 0 1 544 606 1149 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 51596 966 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
10148388 10148388 PRJNA800053_P_NODE_1888_length_613_cov_4.251852_g1733_i0 PRJNA800053 1888 613 4.251852 26.06385276 Naegleria 5761 Heterolobosea other_Eukaryota 1094 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g1733 i0 99.016 49.9559543230016 610 6 99 0 4 613 2926 3535 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 30623 1105 0.990045248868778 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
10148403 10148403 PRJNA800053_P_NODE_4928_length_408_cov_2.456716_g4765_i0 PRJNA800053 4928 408 2.456716 10.02340128 Naegleria 5761 Heterolobosea other_Eukaryota 749 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g4765 i0 100 95.0759803921569 405 0 99 0 4 408 57 461 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 38791 749 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
11000130 11000130 PRJNA800053_P_NODE_22449_length_243_cov_0.905882_g22285_i0 PRJNA800053 22449 243 0.905882 2.20129326 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 95.3 3.59e-15   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g22285 i0 81.897 1.440329218107 116 17 47 3 125 238 3063 3176 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 350 95.3 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
11000150 11000150 PRJNA800053_P_NODE_25229_length_204_cov_5.732824_g25065_i0 PRJNA800053 25229 204 5.732824 11.69496096 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 361 2.6e-95   NTclustered gi|2618963742|gb|OR769034.1| 5762 g25065 i0 98.529 21.1274509803922 204 3 100 0 1 204 2446 2649 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 4310 361 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
11423766 11423766 PRJNA800053_P_NODE_13849_length_273_cov_6.490000_g13685_i0 PRJNA800053 13849 273 6.49 17.7177 Naegleria 5761 Heterolobosea other_Eukaryota 505 1.6e-138   NTclustered gi|2618963742|gb|OR769034.1| 5762 g13685 i0 100 10.1684981684982 273 0 100 0 1 273 5476 5748 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 2776 505 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13549752 13549752 PRJNA800053_P_NODE_14151_length_271_cov_1.893939_g13987_i0 PRJNA800053 14151 271 1.893939 5.13257469 Allovahlkampfia sp. strain SO/1P 500012 Heterolobosea other_Eukaryota 479 9.62e-131   NTclustered gi|701726755|gb|KM220721.1| 500012 g13987 i0 98.524 39.0959409594096 271 4 100 0 1 271 93 363 Allovahlkampfia sp. strain SO/1P isolate 164A 18S ribosomal RNA gene, partial sequence blastn 10595 479 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. strain SO/1P
14824515 14824515 PRJNA800053_P_NODE_10932_length_297_cov_1.321429_g10768_i0 PRJNA800053 10932 297 1.321429 3.92464413 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 510 3.79e-140   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g10768 i0 97.651 5.64983164983165 298 6 100 1 1 297 3614 3911 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1678 510 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
16522717 16522717 PRJNA800053_P_NODE_1593_length_653_cov_2.860345_g1441_i0 PRJNA800053 1593 653 2.860345 18.67805285 Naegleria 5761 Heterolobosea other_Eukaryota 1116 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g1441 i0 100 94.2542113323124 604 0 99 0 50 653 1980 1377 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 61548 1116 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
28790842 28790842 PRJNA800053_P_NODE_19187_length_248_cov_0.880000_g19023_i0 PRJNA800053 19187 248 0.88 2.1824 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 57.4 2.76e-7   NR XP_002673895.1 5762 g19023 i0 79.5 0.532258064516129 44 6 50.8 3 30 155 283 325 XP_002673895.1 uncharacterized protein NAEGRDRAFT_51264 [Naegleria gruberi] diamond 132 57.4 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
32117916 32117916 PRJNA800053_P_NODE_25238_length_204_cov_4.106870_g25074_i0 PRJNA800053 25238 204 4.10687 8.3780148 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 62.4 4.09e-10   NR XP_044566787.1 5763 g25074 i0 65 3.05882352941176 40 14 58.8 0 5 124 114 153 XP_044566787.1 uncharacterized protein FDP41_011935 [Naegleria fowleri] diamond 624 62.8 0.993630573248408 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;