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contig_metadata

5 rows where bioproject = "PRJNA800053" and tax_clade = "CRESS viruses"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • CRESS viruses · 5 ✖

bioproject 1

  • PRJNA800053 · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13973792 13973792 PRJNA800053_P_NODE_16451_length_256_cov_1.562842_g16287_i0 PRJNA800053 16451 256 1.562842 4.00087552 Viruses 10239 Viruses Viruses 462 9.07e-126   NTclustered gi|1848664582|gb|MN891788.1| 2740165 g16287 i0 99.219 2.98828125 256 2 100 0 1 256 416 161 Brassica caulorapa CRESS virus strain pt079-cirl-1, complete genome blastn 765 462 1 Viruses CRESS viruses Shotokuvirae Cressdnaviricota         Brassica caulorapa CRESS virus
21621951 21621951 PRJNA800053_P_NODE_13357_length_277_cov_1.455882_g13193_i0 PRJNA800053 13357 277 1.455882 4.03279314 Viruses 10239 Viruses Viruses 501 2.11e-137   NTclustered gi|1848664582|gb|MN891788.1| 2740165 g13193 i0 99.635 2.96750902527076 274 1 99 0 1 274 1010 737 Brassica caulorapa CRESS virus strain pt079-cirl-1, complete genome blastn 822 501 1 Viruses CRESS viruses Shotokuvirae Cressdnaviricota         Brassica caulorapa CRESS virus
27600326 27600326 PRJNA800053_P_NODE_2964_length_506_cov_2.665127_g2804_i0 PRJNA800053 2964 506 2.665127 13.48554262 Viruses 10239 Viruses Viruses 46.2 0.0258   NR QIN94940.1 2709778 g2804 i0 31.3 1.56521739130435 96 63 56.3 2 484 200 163 256 QIN94940.1 MAG: capsid protein [Forsythia suspensa CRESS virus] diamond 792 46.2 1 Viruses CRESS viruses Shotokuvirae Cressdnaviricota         Forsythia suspensa CRESS virus
27843597 27843597 PRJNA800053_P_NODE_1404_length_684_cov_6.240589_g1257_i0 PRJNA800053 1404 684 6.240589 42.68562876 Trichosanthes kirilowii CRESS virus 2740170 Viruses Viruses 51.2 0.00153   NR QKI29005.1 2740170 g1257 i0 33.8 0.324561403508772 74 49 32.5 0 235 14 133 206 QKI29005.1 Cap [Trichosanthes kirilowii CRESS virus] diamond 222 51.2 1 Viruses CRESS viruses Shotokuvirae Cressdnaviricota         Trichosanthes kirilowii CRESS virus
30180368 30180368 PRJNA800053_P_NODE_492_length_1054_cov_13.013252_g397_i0 PRJNA800053 492 1054 13.013252 137.15967608 Forsythia suspensa CRESS virus 2709778 Viruses Viruses 218 8.16e-65   NR QKI28988.1 2709778 g397 i0 41.5 0.816888045540797 287 158 79.1 5 1040 207 34 319 QKI28988.1 Rep [Forsythia suspensa CRESS virus] diamond 861 218 1 Viruses CRESS viruses Shotokuvirae Cressdnaviricota         Forsythia suspensa CRESS virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;