RNAquarium Metadata Server
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contig_metadata

19 rows where bioproject = "PRJNA799842" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 19 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA799842 · 19 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2069862 2069862 PRJNA799842_P_NODE_173622_length_244_cov_0.900585_g172049_i0 PRJNA799842 173622 244 0.900585 2.1974274 Schistosoma haematobium 6185 Platyhelminthes Platyhelminthes 52.8 0.022   NTclustered gi|2318760655|ref|XM_051209955.1| 6185 g172049 i0 100 0.114754098360656 28 0 11 0 200 227 1694 1721 Schistosoma haematobium uncharacterized protein (MS3_00002383), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium
4622748 4622748 PRJNA799842_P_NODE_19004_length_695_cov_6.567524_g17514_i0 PRJNA799842 19004 695 6.567524 45.6442918 Dugesia japonica 6161 Platyhelminthes Platyhelminthes 231 8.299999999999998e-56   NTclustered gi|326417553|gb|HM204940.1| 6161 g17514 i0 78.393 6.94244604316547 361 74 52 4 35 393 1 359 Dugesia japonica Rho2 GTPase mRNA, complete cds blastn 4825 233 0.991416309012876 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Dugesia Dugesia japonica
10998938 10998938 PRJNA799842_P_NODE_4809_length_1385_cov_2.878049_g4103_i0 PRJNA799842 4809 1385 2.878049 39.86097865 Metazoa 33208 Platyhelminthes Platyhelminthes 587 1.41e-203   NR VUZ55328.1 6216 g4103 i0 64.4 125.852707581227 432 149 92.9 2 1383 97 49 478 VUZ55328.1 unnamed protein product [Hymenolepis diminuta] diamond 174306 587 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis diminuta
25022674 25022674 PRJNA799842_P_NODE_9680_length_1007_cov_61.821199_g8528_i1 PRJNA799842 9680 1007 61.821199 622.53947393 Metazoa 33208 Platyhelminthes Platyhelminthes 257 4.33e-80   NR VDL97057.1 70667 g8528 i1 43.1 12.3396226415094 318 162 90.6 7 914 3 23 335 VDL97057.1 unnamed protein product [Schistocephalus solidus] diamond 12426 258 0.996124031007752 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Schistocephalus Schistocephalus solidus
26809909 26809909 PRJNA799842_P_NODE_30401_length_527_cov_1.682819_g28839_i0 PRJNA799842 30401 527 1.682819 8.86845613 Fasciolidae 27843 Platyhelminthes Platyhelminthes 109 3.9e-25   NR KAA0184147.1 27845 g28839 i0 39.7 4.47438330170778 131 77 74 2 396 7 27 156 KAA0184147.1 5'-amp-activated protein kinase gamma-2 non-catalytic subunit transcript variant 2 [Fasciolopsis buskii] diamond 2358 109 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciolopsis Fasciolopsis buskii
26927451 26927451 PRJNA799842_P_NODE_172342_length_244_cov_0.900585_g170769_i0 PRJNA799842 172342 244 0.900585 2.1974274 Dibothriocephalus latus 60516 Platyhelminthes Platyhelminthes 60.8 1.19e-9   NR VDN08985.1 60516 g170769 i0 38 1.94262295081967 79 38 89.8 3 19 237 26 99 VDN08985.1 unnamed protein product [Dibothriocephalus latus] diamond 474 60.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Dibothriocephalus Dibothriocephalus latus
27505591 27505591 PRJNA799842_P_NODE_91923_length_302_cov_2.689956_g90350_i0 PRJNA799842 91923 302 2.689956 8.12366712 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 84.7 2.77e-18   NR VUZ41626.1 6216 g90350 i0 43.4 5.58278145695364 113 39 90.4 2 2 274 45 154 VUZ41626.1 unnamed protein product [Hymenolepis diminuta] diamond 1686 85.1 0.995299647473561 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis diminuta
27695130 27695130 PRJNA799842_P_NODE_8284_length_1087_cov_2.832347_g7277_i0 PRJNA799842 8284 1087 2.832347 30.78761189 Metazoa 33208 Platyhelminthes Platyhelminthes 75.5 3.75e-11   NR XP_018651719.1 6183 g7277 i0 23.9 7.48482060717571 289 207 76.4 6 966 136 21 308 XP_018651719.1 putative annexin [Schistosoma mansoni] diamond 8136 75.9 0.994729907773386 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
27726863 27726863 PRJNA799842_P_NODE_6584_length_1212_cov_2.131694_g5705_i0 PRJNA799842 6584 1212 2.131694 25.83613128 Metazoa 33208 Platyhelminthes Platyhelminthes 319 9.52e-97   NR VZI39082.1 99802 g5705 i0 59.3 23.0693069306931 253 103 62.6 0 1212 454 186 438 VZI39082.1 unnamed protein product [Spirometra erinaceieuropaei] diamond 27960 319 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
27780699 27780699 PRJNA799842_P_NODE_151484_length_248_cov_0.880000_g149911_i0 PRJNA799842 151484 248 0.88 2.1824 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 49.3 1.96e-4   NR VZI24942.1 99802 g149911 i0 60.5 0.459677419354839 38 15 46 0 115 2 839 876 VZI24942.1 unnamed protein product [Spirometra erinaceieuropaei] diamond 114 49.3 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
27821307 27821307 PRJNA799842_P_NODE_46184_length_418_cov_2.231884_g44611_i0 PRJNA799842 46184 418 2.231884 9.32927512 Schistosoma 6181 Platyhelminthes Platyhelminthes 122 3.5e-29   NR TNN09009.1 6182 g44611 i0 51.7 20.4688995215311 120 55 86.1 2 362 3 347 463 TNN09009.1 TBC1 domain family member 9 [Schistosoma japonicum] diamond 8556 123 0.991869918699187 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
27947491 27947491 PRJNA799842_P_NODE_67385_length_348_cov_1.040000_g65812_i0 PRJNA799842 67385 348 1.04 3.6192 Opisthokonta 33154 Platyhelminthes Platyhelminthes 91.7 6.9e-20   NR KAA0187197.1 27845 g65812 i0 40.2 11.0603448275862 92 55 79.3 0 72 347 55 146 KAA0187197.1 Serine/threonine-protein kinase PAK 1 [Fasciolopsis buskii] diamond 3849 92.4 0.992424242424242 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciolopsis Fasciolopsis buskii
28073634 28073634 PRJNA799842_P_NODE_2845_length_1681_cov_18.000622_g2342_i0 PRJNA799842 2845 1681 18.000622 302.59045582 Hymenolepididae 6214 Platyhelminthes Platyhelminthes 113 3.28e-25   NR CDS26983.2 85433 g2342 i0 42.5 0.580011897679952 160 73 27.5 3 1648 1187 2 148 CDS26983.2 RNA and export factor binding protein 2 [Hymenolepis microstoma] diamond 975 114 0.991228070175439 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis microstoma
28538571 28538571 PRJNA799842_P_NODE_158687_length_247_cov_0.885057_g157114_i0 PRJNA799842 158687 247 0.885057 2.18609079 Paragonimus skrjabini miyazakii 59628 Platyhelminthes Platyhelminthes 51.2 3.52e-5   NR KAF7253001.1 59628 g157114 i0 38.4 1.77327935222672 73 39 86.2 2 2 214 164 232 KAF7253001.1 hypothetical protein EG68_09847, partial [Paragonimus skrjabini miyazakii] diamond 438 51.2 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Troglotrematidae Paragonimus Paragonimus skrjabini miyazakii
29990928 29990928 PRJNA799842_P_NODE_42051_length_440_cov_0.831063_g40480_i0 PRJNA799842 42051 440 0.831063 3.6566772 Paragonimus heterotremus 100268 Platyhelminthes Platyhelminthes 67.8 5.79e-10   NR KAF5401863.1 100268 g40480 i0 35.9 1.82727272727273 128 75 87.3 4 440 57 300 420 KAF5401863.1 hypothetical protein PHET_04704 [Paragonimus heterotremus] diamond 804 67.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Troglotrematidae Paragonimus Paragonimus heterotremus
30031488 30031488 PRJNA799842_P_NODE_158631_length_247_cov_0.885057_g157058_i0 PRJNA799842 158631 247 0.885057 2.18609079 Schistosoma 6181 Platyhelminthes Platyhelminthes 45.1 0.00556   NR RTG89701.1 6184 g157058 i0 70.4 1.96761133603239 27 8 32.8 0 83 3 156 182 RTG89701.1 T-box protein 1 [Schistosoma bovis] diamond 486 45.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma bovis
30085549 30085549 PRJNA799842_P_NODE_75872_length_330_cov_1.046693_g74299_i0 PRJNA799842 75872 330 1.046693 3.4540869 Trichobilharzia szidati 157070 Platyhelminthes Platyhelminthes 70.9 9.16e-12   NR CAH8872033.1 157070 g74299 i0 44.4 0.818181818181818 90 50 81.8 0 272 3 25 114 CAH8872033.1 unnamed protein product [Trichobilharzia szidati] diamond 270 70.9 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Trichobilharzia Trichobilharzia szidati
32393650 32393650 PRJNA799842_P_NODE_87039_length_310_cov_1.704641_g85466_i0 PRJNA799842 87039 310 1.704641 5.2843871 Calicophoron daubneyi 300641 Platyhelminthes Platyhelminthes 62.8 7.79e-9   NR CAL5136495.1 300641 g85466 i0 48.2 3.50322580645161 56 29 54.2 0 1 168 405 460 CAL5136495.1 unnamed protein product [Calicophoron daubneyi] diamond 1086 62.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Paramphistomidae Calicophoron Calicophoron daubneyi
32740925 32740925 PRJNA799842_P_NODE_49640_length_403_cov_1.545455_g48067_i0 PRJNA799842 49640 403 1.545455 6.22818365 Schistocephalus solidus 70667 Platyhelminthes Platyhelminthes 163 3.91e-44   NR VDM04108.1 70667 g48067 i0 59.4 5.95533498759305 133 54 99 0 401 3 484 616 VDM04108.1 unnamed protein product [Schistocephalus solidus] diamond 2400 163 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Schistocephalus Schistocephalus solidus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;