RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA799842", tax_phylum = "Hofneiviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Hofneiviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA799842 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12273595 12273595 PRJNA799842_P_NODE_181450_length_242_cov_0.911243_g179877_i0 PRJNA799842 181450 242 0.911243 2.20520806 Inoviridae sp. 2219103 Viruses Viruses 448 2.3799999999999995e-121   NTclustered gi|2056883710|tpg|BK053541.1| 2219103 g179877 i0 100 4 242 0 100 0 1 242 14059 14300 MAG TPA_asm: Inoviridae sp. isolate ct2Vp13, partial genome blastn 968 448 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
18645328 18645328 PRJNA799842_P_NODE_161155_length_246_cov_0.890173_g159582_i0 PRJNA799842 161155 246 0.890173 2.18982558 Inoviridae sp. 2219103 Viruses Viruses 305 1.54e-78   NTclustered gi|2059746028|tpg|BK027036.1| 2219103 g159582 i0 89.069 7.03252032520325 247 25 100 2 1 246 4355 4600 MAG TPA_asm: Inoviridae sp. isolate ctjgv8, partial genome blastn 1730 305 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;