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contig_metadata

21 rows where bioproject = "PRJNA799842" and tax_phylum = "Chlamydiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 21 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA799842 · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2069344 2069344 PRJNA799842_P_NODE_145342_length_249_cov_0.875000_g143769_i0 PRJNA799842 145342 249 0.875 2.17875 Chlamydiota bacterium 2081524 Bacteria Bacteria 128 4.77e-33   NR NGX59910.1 2081524 g143769 i0 78.4 1.78313253012048 74 16 89.2 0 224 3 317 390 NGX59910.1 hypothetical protein [Chlamydiota bacterium] diamond 444 128 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
5047198 5047198 PRJNA799842_P_NODE_191144_length_233_cov_2.306250_g189571_i0 PRJNA799842 191144 233 2.30625 5.3735625 Candidatus Protochlamydia 282132 Bacteria Bacteria 121 5.64e-23   NTclustered gi|1691252667|emb|BX908798.2| 264201 g189571 i0 86.916 108.789699570815 107 14 46 0 7 113 1251054 1251160 Candidatus Protochlamydia amoebophila UWE25 complete genome blastn 25348 121 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Candidatus Protochlamydia Candidatus Protochlamydia amoebophila
26832551 26832551 PRJNA799842_P_NODE_173381_length_244_cov_0.900585_g171808_i0 PRJNA799842 173381 244 0.900585 2.1974274 Candidatus Sacchlamyda saccharinae 3076872 Bacteria Bacteria 95.1 1.44e-20   NR MDN3507167.1 3076872 g171808 i0 66.2 1.81967213114754 74 25 91 0 222 1 70 143 MDN3507167.1 protein translocase subunit SecD [Candidatus Sacchlamyda saccharinae] diamond 444 95.1 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae Candidatus Sacchlamyda Candidatus Sacchlamyda saccharinae
27527920 27527920 PRJNA799842_P_NODE_162323_length_246_cov_0.890173_g160750_i0 PRJNA799842 162323 246 0.890173 2.18982558 Chlamydiales bacterium 2047757 Bacteria Bacteria 44.3 0.0108   NR MFT4554508.1 2047757 g160750 i0 44 0.609756097560976 50 28 61 0 187 38 541 590 MFT4554508.1 hypothetical protein [Chlamydiales bacterium] diamond 150 44.3 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
27527930 27527930 PRJNA799842_P_NODE_178803_length_243_cov_0.905882_g177230_i0 PRJNA799842 178803 243 0.905882 2.20129326 Parachlamydiales bacterium 2052178 Bacteria Bacteria 112 4.39e-28   NR MBF8262504.1 2052178 g177230 i0 66.7 1 81 27 100 0 1 243 136 216 MBF8262504.1 Transket pyr protein [Parachlamydiales bacterium] diamond 243 112 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales     Parachlamydiales bacterium
27780712 27780712 PRJNA799842_P_NODE_169384_length_245_cov_0.895349_g167811_i0 PRJNA799842 169384 245 0.895349 2.19360505 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 43.5 0.0194   NR MFI0435743.1 2052176 g167811 i0 44 0.612244897959184 50 27 61.2 1 96 245 1 49 MFI0435743.1 transglutaminase domain-containing protein [Parachlamydiaceae bacterium] diamond 150 43.5 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
27947487 27947487 PRJNA799842_P_NODE_187325_length_241_cov_0.916667_g185752_i0 PRJNA799842 187325 241 0.916667 2.20916747 Bacteria 2 Bacteria Bacteria 119 1.22e-29   NR HEY4831882.1 2026802 g185752 i0 71.6 1.91701244813278 74 21 92.1 0 240 19 259 332 HEY4831882.1 sugar phosphate nucleotidyltransferase [Waddliaceae bacterium] diamond 462 119 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Waddliaceae   Waddliaceae bacterium
28128028 28128028 PRJNA799842_P_NODE_62765_length_359_cov_3.912587_g61192_i0 PRJNA799842 62765 359 3.912587 14.04618733 Chlamydiota bacterium 2081524 Bacteria Bacteria 44.3 0.0396   NR NGX31504.1 2081524 g61192 i0 25.3 0.727019498607242 87 60 68.5 1 349 104 750 836 NGX31504.1 Serine/threonine-protein kinase PknD [Chlamydiota bacterium] diamond 261 44.3 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
28199814 28199814 PRJNA799842_P_NODE_150786_length_248_cov_0.880000_g149213_i0 PRJNA799842 150786 248 0.88 2.1824 Bacteria 2 Bacteria Bacteria 47.4 9.22e-4   NR MCH9626098.1 2047757 g149213 i0 37.7 1.4758064516129 61 37 73.8 1 244 62 559 618 MCH9626098.1 Flagellar biosynthesis protein FlhA [Chlamydiales bacterium] diamond 366 47.4 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
28326152 28326152 PRJNA799842_P_NODE_135786_length_251_cov_0.865169_g134213_i0 PRJNA799842 135786 251 0.865169 2.17157419 Pseudomonadati 3379134 Bacteria Bacteria 77.4 2.63e-14   NR NDD58466.1 2081524 g134213 i0 40.9 4.20717131474104 88 47 99.2 1 1 249 986 1073 NDD58466.1 ABC transporter permease subunit [Chlamydiota bacterium] diamond 1056 77.8 0.994858611825193 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
28389396 28389396 PRJNA799842_P_NODE_145606_length_249_cov_0.875000_g144033_i0 PRJNA799842 145606 249 0.875 2.17875 Parachlamydiales 1963360 Bacteria Bacteria 136 1.21e-36   NR MFQ5728871.1 2026802 g144033 i0 74.4 4.89156626506024 82 21 98.8 0 248 3 159 240 MFQ5728871.1 ABC transporter substrate-binding protein [Waddliaceae bacterium] diamond 1218 136 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Waddliaceae   Waddliaceae bacterium
29106781 29106781 PRJNA799842_P_NODE_152008_length_248_cov_0.880000_g150435_i0 PRJNA799842 152008 248 0.88 2.1824 Waddliaceae bacterium 2026802 Bacteria Bacteria 102 2.5499999999999998e-23   NR MFQ5729505.1 2026802 g150435 i0 71.2 3.94354838709677 66 19 79.8 0 246 49 408 473 MFQ5729505.1 succinylglutamate-semialdehyde dehydrogenase [Waddliaceae bacterium] diamond 978 102 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Waddliaceae   Waddliaceae bacterium
29927828 29927828 PRJNA799842_P_NODE_148591_length_249_cov_0.875000_g147018_i0 PRJNA799842 148591 249 0.875 2.17875 Chlamydiia bacterium 2052156 Bacteria Bacteria 66.2 2.02e-10   NR MCB1134648.1 2052156 g147018 i0 52.8 0.63855421686747 53 25 63.9 0 3 161 408 460 MCB1134648.1 ADP-ribosylglycohydrolase family protein [Chlamydiia bacterium] diamond 159 66.2 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia       Chlamydiia bacterium
30022608 30022608 PRJNA799842_P_NODE_181351_length_242_cov_0.911243_g179778_i0 PRJNA799842 181351 242 0.911243 2.20520806 Waddliaceae bacterium 2026802 Bacteria Bacteria 75.9 7.89e-14   NR HEY4832500.1 2026802 g179778 i0 47 1.63636363636364 66 35 81.8 0 217 20 38 103 HEY4832500.1 DUF6531 domain-containing protein [Waddliaceae bacterium] diamond 396 75.9 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Waddliaceae   Waddliaceae bacterium
30085490 30085490 PRJNA799842_P_NODE_135312_length_251_cov_0.865169_g133739_i0 PRJNA799842 135312 251 0.865169 2.17157419 Rhabdochlamydiaceae bacterium 2047756 Bacteria Bacteria 148 2.65e-39   NR HKZ00038.1 2047756 g133739 i0 89 0.9800796812749 82 9 98 0 251 6 120 201 HKZ00038.1 GAF domain-containing protein [Rhabdochlamydiaceae bacterium] diamond 246 148 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae   Rhabdochlamydiaceae bacterium
30117077 30117077 PRJNA799842_P_NODE_164512_length_246_cov_0.890173_g162939_i0 PRJNA799842 164512 246 0.890173 2.18982558 Chlamydiota bacterium 2081524 Bacteria Bacteria 113 5.36e-27   NR MDP3981722.1 2081524 g162939 i0 66.3 0.975609756097561 80 27 97.6 0 3 242 87 166 MDP3981722.1 nitric-oxide reductase large subunit [Chlamydiota bacterium] diamond 240 113 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
30211795 30211795 PRJNA799842_P_NODE_147212_length_249_cov_0.875000_g145639_i0 PRJNA799842 147212 249 0.875 2.17875 Chlamydiota bacterium 2081524 Bacteria Bacteria 87 5.74e-18   NR NGX43188.1 2081524 g145639 i0 58.5 0.987951807228916 82 30 95.2 2 249 13 254 334 NGX43188.1 hypothetical protein [Chlamydiota bacterium] diamond 246 87 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
30307283 30307283 PRJNA799842_P_NODE_147992_length_249_cov_0.875000_g146419_i0 PRJNA799842 147992 249 0.875 2.17875 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 141 4.1e-38   NR MEI8125587.1 2052176 g146419 i0 82.9 0.987951807228916 82 14 98.8 0 247 2 302 383 MEI8125587.1 MFS transporter [Parachlamydiaceae bacterium] diamond 246 141 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
31539482 31539482 PRJNA799842_P_NODE_161396_length_246_cov_0.890173_g159823_i0 PRJNA799842 161396 246 0.890173 2.18982558 Chlamydiales bacterium 2047757 Bacteria Bacteria 107 3.3200000000000005e-27   NR MCH9626885.1 2047757 g159823 i0 59.8 2 82 32 98.8 1 244 2 5 86 MCH9626885.1 hypothetical protein [Chlamydiales bacterium] diamond 492 107 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
31602776 31602776 PRJNA799842_P_NODE_176736_length_243_cov_0.905882_g175163_i0 PRJNA799842 176736 243 0.905882 2.20129326 Chlamydiota bacterium 2081524 Bacteria Bacteria 89 2.24e-19   NR MEM1282429.1 2081524 g175163 i0 57.5 0.987654320987654 80 33 98.8 1 242 3 92 170 MEM1282429.1 sulfite exporter TauE/SafE family protein [Chlamydiota bacterium] diamond 240 89 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
31729077 31729077 PRJNA799842_P_NODE_169597_length_245_cov_0.895349_g168024_i0 PRJNA799842 169597 245 0.895349 2.19360505 Candidatus Protochlamydia naegleriophila 389348 Bacteria Bacteria 77.4 2.33e-14   NR WP_059059846.1 389348 g168024 i0 54.4 2.82857142857143 79 34 95.5 2 235 2 191 268 WP_059059846.1 ABC transporter ATP-binding protein [Candidatus Protochlamydia naegleriophila] diamond 693 77.4 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Candidatus Protochlamydia Candidatus Protochlamydia naegleriophila

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;