RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA799842" and tax_phylum = "Candidatus Hermodarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hermodarchaeota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA799842 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30053843 30053843 PRJNA799842_P_NODE_149011_length_249_cov_0.875000_g147438_i0 PRJNA799842 149011 249 0.875 2.17875 Candidatus Hermodarchaeota archaeon 2799008 Archaea Archaea 50.1 5.93e-5   NR MDO8056893.1 2799008 g147438 i0 36.9 1.65060240963855 65 38 74.7 2 220 35 12 76 MDO8056893.1 helix-turn-helix domain-containing protein [Candidatus Hermodarchaeota archaeon] diamond 411 50.1 1 Archaea   Promethearchaeati Candidatus Hermodarchaeota         Candidatus Hermodarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;