RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

9 rows where bioproject = "PRJNA799842" and tax_phylum = "Candidatus Deferrimicrobiota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Deferrimicrobiota · 9 ✖

bioproject 1

  • PRJNA799842 · 9 ✖

analysis 1

tax_kingdom 0

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25020280 25020280 PRJNA799842_P_NODE_157620_length_247_cov_0.885057_g156047_i0 PRJNA799842 157620 247 0.885057 2.18609079 Candidatus Deferrimicrobiaceae bacterium 3069220 Bacteria Bacteria 159 2.1e-44   NR HSQ49046.1 3069220 g156047 i0 97.6 0.995951417004049 82 2 99.6 0 247 2 8 89 HSQ49046.1 preprotein translocase subunit SecY [Candidatus Deferrimicrobiaceae bacterium] diamond 246 159 1 Bacteria     Candidatus Deferrimicrobiota Candidatus Deferrimicrobia Candidatus Deferrimicrobiales Candidatus Deferrimicrobiaceae   Candidatus Deferrimicrobiaceae bacterium
26958893 26958893 PRJNA799842_P_NODE_148162_length_249_cov_0.875000_g146589_i0 PRJNA799842 148162 249 0.875 2.17875 Candidatus Deferrimicrobium sp. 3060586 Bacteria Bacteria 155 1.5299999999999998e-42   NR HEX2709340.1 3060586 g146589 i0 95.1 2.96385542168675 82 4 98.8 0 248 3 127 208 HEX2709340.1 AMIN domain-containing protein [Candidatus Deferrimicrobium sp.] diamond 738 155 1 Bacteria     Candidatus Deferrimicrobiota Candidatus Deferrimicrobia Candidatus Deferrimicrobiales Candidatus Deferrimicrobiaceae Candidatus Deferrimicrobium Candidatus Deferrimicrobium sp.
27401849 27401849 PRJNA799842_P_NODE_90423_length_305_cov_1.090517_g88850_i0 PRJNA799842 90423 305 1.090517 3.32607685 Candidatus Deferrimicrobiaceae bacterium 3069220 Bacteria Bacteria 94.7 2.22e-22   NR HSQ48434.1 3069220 g88850 i0 88 0.491803278688525 50 6 49.2 0 152 3 25 74 HSQ48434.1 type II toxin-antitoxin system VapC family toxin [Candidatus Deferrimicrobiaceae bacterium] diamond 150 94.7 1 Bacteria     Candidatus Deferrimicrobiota Candidatus Deferrimicrobia Candidatus Deferrimicrobiales Candidatus Deferrimicrobiaceae   Candidatus Deferrimicrobiaceae bacterium
29296099 29296099 PRJNA799842_P_NODE_141089_length_250_cov_0.870056_g139516_i0 PRJNA799842 141089 250 0.870056 2.17514 Candidatus Deferrimicrobiaceae bacterium 3069220 Bacteria Bacteria 152 3.05e-44   NR HSQ48759.1 3069220 g139516 i0 97.6 0.984 82 2 98.4 0 247 2 54 135 HSQ48759.1 archaeal proteasome endopeptidase complex subunit beta [Candidatus Deferrimicrobiaceae bacterium] diamond 246 152 1 Bacteria     Candidatus Deferrimicrobiota Candidatus Deferrimicrobia Candidatus Deferrimicrobiales Candidatus Deferrimicrobiaceae   Candidatus Deferrimicrobiaceae bacterium
29422254 29422254 PRJNA799842_P_NODE_92149_length_302_cov_1.344978_g90576_i0 PRJNA799842 92149 302 1.344978 4.06183356 Candidatus Deferrimicrobiaceae bacterium 3069220 Bacteria Bacteria 188 1.03e-56   NR HSQ48794.1 3069220 g90576 i0 96 0.983443708609272 99 4 98.3 0 298 2 43 141 HSQ48794.1 trypsin-like peptidase domain-containing protein [Candidatus Deferrimicrobiaceae bacterium] diamond 297 188 1 Bacteria     Candidatus Deferrimicrobiota Candidatus Deferrimicrobia Candidatus Deferrimicrobiales Candidatus Deferrimicrobiaceae   Candidatus Deferrimicrobiaceae bacterium
30780685 30780685 PRJNA799842_P_NODE_159434_length_247_cov_0.885057_g157861_i0 PRJNA799842 159434 247 0.885057 2.18609079 Candidatus Deferrimicrobiaceae bacterium 3069220 Bacteria Bacteria 120 6.209999999999999e-31   NR HSQ48725.1 3069220 g157861 i0 80.3 3.44939271255061 71 14 86.2 0 215 3 137 207 HSQ48725.1 DUF2090 domain-containing protein [Candidatus Deferrimicrobiaceae bacterium] diamond 852 120 1 Bacteria     Candidatus Deferrimicrobiota Candidatus Deferrimicrobia Candidatus Deferrimicrobiales Candidatus Deferrimicrobiaceae   Candidatus Deferrimicrobiaceae bacterium
32425235 32425235 PRJNA799842_P_NODE_149659_length_248_cov_1.320000_g148086_i0 PRJNA799842 149659 248 1.32 3.2736 Candidatus Deferrimicrobiaceae bacterium 3069220 Bacteria Bacteria 147 3.27e-41   NR HSQ48813.1 3069220 g148086 i0 98.8 0.991935483870968 82 1 99.2 0 246 1 214 295 HSQ48813.1 magnesium transporter CorA family protein [Candidatus Deferrimicrobiaceae bacterium] diamond 246 147 1 Bacteria     Candidatus Deferrimicrobiota Candidatus Deferrimicrobia Candidatus Deferrimicrobiales Candidatus Deferrimicrobiaceae   Candidatus Deferrimicrobiaceae bacterium
32614826 32614826 PRJNA799842_P_NODE_157400_length_247_cov_0.885057_g155827_i0 PRJNA799842 157400 247 0.885057 2.18609079 Candidatus Deferrimicrobiaceae bacterium 3069220 Bacteria Bacteria 102 8.45e-25   NR HSQ49606.1 3069220 g155827 i0 80.9 0.825910931174089 68 12 82.6 1 204 1 43 109 HSQ49606.1 endonuclease III [Candidatus Deferrimicrobiaceae bacterium] diamond 204 102 1 Bacteria     Candidatus Deferrimicrobiota Candidatus Deferrimicrobia Candidatus Deferrimicrobiales Candidatus Deferrimicrobiaceae   Candidatus Deferrimicrobiaceae bacterium
32866631 32866631 PRJNA799842_P_NODE_185320_length_242_cov_0.911243_g183747_i0 PRJNA799842 185320 242 0.911243 2.20520806 Candidatus Deferrimicrobiaceae bacterium 3069220 Bacteria Bacteria 165 1.53e-46   NR HSQ49424.1 3069220 g183747 i0 96.3 0.991735537190083 80 3 99.2 0 3 242 340 419 HSQ49424.1 glycoside hydrolase family 57 protein [Candidatus Deferrimicrobiaceae bacterium] diamond 240 165 1 Bacteria     Candidatus Deferrimicrobiota Candidatus Deferrimicrobia Candidatus Deferrimicrobiales Candidatus Deferrimicrobiaceae   Candidatus Deferrimicrobiaceae bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;