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contig_metadata

31 rows where bioproject = "PRJNA799842" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 31 ✖

bioproject 1

  • PRJNA799842 · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
795090 795090 PRJNA799842_P_NODE_51781_length_395_cov_0.956522_g50208_i0 PRJNA799842 51781 395 0.956522 3.7782619 Tetradesmus distendus 113531 Plants Plants 680 0   NTclustered gi|2692951646|ref|NC_086753.1| 113531 g50208 i0 97.727 142.235443037975 396 8 100 1 1 395 81324 80929 Tetradesmus distendus strain FBCC-A1020 chloroplast, complete genome blastn 56183 680 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus distendus
3343854 3343854 PRJNA799842_P_NODE_107803_length_282_cov_0.870813_g106230_i0 PRJNA799842 107803 282 0.870813 2.45569266 Chlorosarcinopsis eremi 332213 Plants Plants 510 3.57e-140   NTclustered gi|1642525901|ref|NC_042250.1| 332213 g106230 i0 99.291 136.741134751773 282 2 100 0 1 282 132047 132328 Chlorosarcinopsis eremi culture UTEX:1186 chloroplast, complete genome blastn 38561 510 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlorosarcinales Chlorosarcinaceae Chlorosarcinopsis Chlorosarcinopsis eremi
3770254 3770254 PRJNA799842_P_NODE_111883_length_277_cov_1.132353_g110310_i0 PRJNA799842 111883 277 1.132353 3.13661781 Trebouxiophyceae 75966 Plants Plants 512 9.73e-141   NTclustered gi|723456786|ref|NC_025525.1| 3171 g110310 i0 100 104.924187725632 277 0 100 0 1 277 4374 4650 Myrmecia israelensis culture-collection UTEX:1181 chloroplast, complete genome blastn 29064 512 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia Myrmecia israelensis
7171626 7171626 PRJNA799842_P_NODE_133266_length_252_cov_1.720670_g131693_i0 PRJNA799842 133266 252 1.72067 4.3360884 Bracteacoccus aerius 50041 Plants Plants 52.8 0.023   NTclustered gi|1008861732|ref|NC_029675.1| 50041 g131693 i0 100 0.111111111111111 28 0 11 0 10 37 25208 25235 Bracteacoccus aerius strain UTEX 1250 chloroplast, complete genome blastn 28 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Bracteacoccaceae Bracteacoccus Bracteacoccus aerius
8447453 8447453 PRJNA799842_P_NODE_19747_length_680_cov_4.140033_g18250_i0 PRJNA799842 19747 680 4.140033 28.1522244 Eukaryota 2759 Plants Plants 320 6.689999999999998e-99   NR PRW60132.1 3076 g18250 i0 75.9 36.0397058823529 203 49 89.6 0 665 57 1 203 PRW60132.1 60S ribosomal L15 [Chlorella sorokiniana] diamond 24507 320 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
12698108 12698108 PRJNA799842_P_NODE_10990_length_946_cov_1.617411_g9805_i0 PRJNA799842 10990 946 1.617411 15.30070806 Eukaryota 2759 Plants Plants 660 0   NTclustered gi|969822364|gb|KT950949.1| 3130 g9805 i0 80.457 94.6395348837209 875 161 92 10 51 920 2 871 Bryopsis plumosa actin mRNA, partial cds blastn 89529 665 0.992481203007519 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Bryopsis Bryopsis plumosa
13548935 13548935 PRJNA799842_P_NODE_63251_length_358_cov_1.319298_g61678_i0 PRJNA799842 63251 358 1.319298 4.72308684 Myrmecia israelensis 3171 Plants Plants 662 0   NTclustered gi|723456786|ref|NC_025525.1| 3171 g61678 i0 100 121.645251396648 358 0 100 0 1 358 3044 2687 Myrmecia israelensis culture-collection UTEX:1181 chloroplast, complete genome blastn 43549 662 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia Myrmecia israelensis
14822837 14822837 PRJNA799842_P_NODE_24212_length_602_cov_1.625709_g22674_i0 PRJNA799842 24212 602 1.625709 9.78676818 Pleurastrum terricola 34116 Plants Plants 1112 0   NTclustered gi|153805558|ref|NC_009681.1| 34116 g22674 i0 100 136.586378737542 602 0 100 0 1 602 1424 823 Leptosira terrestris chloroplast, complete genome blastn 82225 1112 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Pleurastraceae Pleurastrum Pleurastrum terricola
16097289 16097289 PRJNA799842_P_NODE_37173_length_470_cov_1.627204_g35602_i0 PRJNA799842 37173 470 1.627204 7.6478588 Chlorellaceae 35461 Plants Plants 176 2.3699999999999998e-48   NR RMZ52481.1 3075 g35602 i0 72 10.0659574468085 157 42 98.9 1 468 4 120 276 RMZ52481.1 hypothetical protein APUTEX25_003624 [Auxenochlorella protothecoides] diamond 4731 176 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
17373089 17373089 PRJNA799842_P_NODE_33214_length_501_cov_1.077103_g31645_i0 PRJNA799842 33214 501 1.077103 5.39628603 Volvox carteri 3067 Plants Plants 156 3.63e-33   NTclustered gi|302841991|ref|XM_002952494.1| 3068 g31645 i0 90 23.6986027944112 120 12 24 0 1 120 2127 2246 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_75431), mRNA blastn 11873 156 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
18646799 18646799 PRJNA799842_P_NODE_62995_length_359_cov_1.076923_g61422_i0 PRJNA799842 62995 359 1.076923 3.86615357 Chlorellaceae 35461 Plants Plants 198 1.92e-57   NR AKP17750.1 3078 g61422 i0 81.5 9.94428969359332 119 22 99.4 0 357 1 233 351 AKP17750.1 heat shock protein 70 [Auxenochlorella pyrenoidosa] diamond 3570 198 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella pyrenoidosa
19922172 19922172 PRJNA799842_P_NODE_63516_length_357_cov_2.169014_g61943_i0 PRJNA799842 63516 357 2.169014 7.74337998 Coccomyxa 41891 Plants Plants 177 7.419999999999998e-55   NR CAL5219820.1 1274662 g61943 i0 83.3 8.02521008403361 108 17 90.8 1 325 2 31 137 CAL5219820.1 g1732 [Coccomyxa viridis] diamond 2865 177 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
20345168 20345168 PRJNA799842_P_NODE_139196_length_250_cov_1.774011_g137623_i0 PRJNA799842 139196 250 1.774011 4.4350275 Balticola 1328802 Plants Plants 350 7.17e-92   NTclustered gi|6120015|gb|AF183475.1| 51690 g137623 i0 92.032 99.436 251 17 100 3 1 250 1646 1398 Balticola zimbabwiensis strain UTEX LB 1758 28S ribosomal RNA gene, partial sequence blastn 24859 351 0.997150997150997 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Balticola Balticola zimbabwiensis
22470063 22470063 PRJNA799842_P_NODE_115778_length_272_cov_1.522613_g114205_i0 PRJNA799842 115778 272 1.522613 4.14150736 Pleurastrum terricola 34116 Plants Plants 492 1.24e-134   NTclustered gi|153805558|ref|NC_009681.1| 34116 g114205 i0 99.265 104.411764705882 272 2 100 0 1 272 131290 131561 Leptosira terrestris chloroplast, complete genome blastn 28400 492 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Pleurastraceae Pleurastrum Pleurastrum terricola
27054076 27054076 PRJNA799842_P_NODE_161602_length_246_cov_0.890173_g160029_i0 PRJNA799842 161602 246 0.890173 2.18982558 Chlamydomonas sp. UWO 241 1653778 Plants Plants 49.3 1.99e-4   NR KAG1660655.1 1653778 g160029 i0 55.8 1.13414634146341 43 19 52.4 0 16 144 234 276 KAG1660655.1 hypothetical protein FOA52_008015 [Chlamydomonas sp. UWO 241] diamond 279 49.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. UWO 241
27370391 27370391 PRJNA799842_P_NODE_133203_length_252_cov_1.720670_g131630_i0 PRJNA799842 133203 252 1.72067 4.3360884 Monoraphidium minutum 39955 Plants Plants 52 2.26e-5   NR KAI8472079.1 39955 g131630 i0 35.8 0.964285714285714 81 42 84.5 2 37 249 300 380 KAI8472079.1 MAG: hypothetical protein J3K34DRAFT_415072 [Monoraphidium minutum] diamond 243 52 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium minutum
27442532 27442532 PRJNA799842_P_NODE_88283_length_308_cov_1.638298_g86710_i0 PRJNA799842 88283 308 1.638298 5.04595784 Selenastraceae 35466 Plants Plants 81.3 2.31e-15   NR KAI8462996.1 39955 g86710 i0 57.8 3.7012987012987 64 26 61.4 1 117 305 68 131 KAI8462996.1 MAG: kinase-like domain-containing protein [Monoraphidium minutum] diamond 1140 81.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium minutum
27496535 27496535 PRJNA799842_P_NODE_72003_length_338_cov_0.913208_g70430_i0 PRJNA799842 72003 338 0.913208 3.08664304 Chlorella vulgaris 3077 Plants Plants 73.9 1.87e-14   NR KAI3425097.1 3077 g70430 i0 44.8 0.772189349112426 87 48 77.2 0 324 64 5 91 KAI3425097.1 hypothetical protein D9Q98_008475 [Chlorella vulgaris] diamond 261 73.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
28042221 28042221 PRJNA799842_P_NODE_186605_length_241_cov_0.916667_g185032_i0 PRJNA799842 186605 241 0.916667 2.20916747 Volvocaceae 3065 Plants Plants 114 8.27e-30   NR GLC33227.1 330485 g185032 i0 64.6 3.89626556016598 79 28 98.3 0 3 239 58 136 GLC33227.1 hypothetical protein PLESTM_000038100 [Pleodorina starrii] diamond 939 114 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Pleodorina Pleodorina starrii
28452773 28452773 PRJNA799842_P_NODE_116506_length_271_cov_1.944444_g114933_i0 PRJNA799842 116506 271 1.944444 5.26944324 Chlamydomonadales 3042 Plants Plants 68.6 4.15e-11   NR KAJ9528508.1 44745 g114933 i0 42 6.53136531365314 88 49 97.4 1 266 3 196 281 KAJ9528508.1 hypothetical protein QJQ45_020506 [Haematococcus lacustris] diamond 1770 68.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
29201538 29201538 PRJNA799842_P_NODE_175769_length_243_cov_1.358824_g174196_i0 PRJNA799842 175769 243 1.358824 3.30194232 Scenedesmus sp. NREL 46B-D3 2650976 Plants Plants 55.8 7.02e-7   NR KAF6264380.1 2650976 g174196 i0 34.4 3.44444444444444 96 40 92.6 4 227 3 26 119 KAF6264380.1 hypothetical protein COO60DRAFT_178883 [Scenedesmus sp. NREL 46B-D3] diamond 837 55.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. NREL 46B-D3
29557542 29557542 PRJNA799842_P_NODE_102070_length_288_cov_1.432558_g100497_i0 PRJNA799842 102070 288 1.432558 4.12576704 Eukaryota 2759 Plants Plants 133 1.2899999999999998e-35   NR KAK2076646.1 3111 g100497 i0 67.4 11.7916666666667 95 30 99 1 286 2 181 274 KAK2076646.1 hypothetical protein QBZ16_005406 [Prototheca wickerhamii] diamond 3396 133 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
29643123 29643123 PRJNA799842_P_NODE_190230_length_241_cov_0.916667_g188657_i0 PRJNA799842 190230 241 0.916667 2.20916747 Symbiochloris irregularis 706552 Plants Plants 89.4 1.46e-18   NR KAK9807397.1 706552 g188657 i0 52.9 5.71369294605809 70 32 85.9 1 207 1 192 261 KAK9807397.1 hypothetical protein WJX73_000390 [Symbiochloris irregularis] diamond 1377 89.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis
29674697 29674697 PRJNA799842_P_NODE_62050_length_361_cov_2.024306_g60477_i0 PRJNA799842 62050 361 2.024306 7.30774466 Auxenochlorella protothecoides 3075 Plants Plants 73.9 1.66e-12   NR RMZ56356.1 3075 g60477 i0 51.5 1.78670360110803 68 33 56.5 0 218 15 42 109 RMZ56356.1 hypothetical protein APUTEX25_004713 [Auxenochlorella protothecoides] diamond 645 73.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
29706158 29706158 PRJNA799842_P_NODE_145170_length_249_cov_0.875000_g143597_i0 PRJNA799842 145170 249 0.875 2.17875 Scenedesmus sp. NREL 46B-D3 2650976 Plants Plants 76.6 9.34e-16   NR KAF6265528.1 2650976 g143597 i0 62.3 0.734939759036145 61 23 73.5 0 3 185 62 122 KAF6265528.1 hypothetical protein COO60DRAFT_1633636 [Scenedesmus sp. NREL 46B-D3] diamond 183 76.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. NREL 46B-D3
29959224 29959224 PRJNA799842_P_NODE_172111_length_244_cov_0.900585_g170538_i0 PRJNA799842 172111 244 0.900585 2.1974274 Scenedesmus sp. NREL 46B-D3 2650976 Plants Plants 58.9 7.72e-8   NR KAF6255732.1 2650976 g170538 i0 42 8.96311475409836 81 33 97.1 2 241 5 125 193 KAF6255732.1 inositol hexakisphosphate-domain-containing protein [Scenedesmus sp. NREL 46B-D3] diamond 2187 58.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. NREL 46B-D3
30347887 30347887 PRJNA799842_P_NODE_117292_length_270_cov_2.497462_g115719_i0 PRJNA799842 117292 270 2.497462 6.7431474 Trebouxia 13786 Plants Plants 102 1.41e-26   NR KAL0020376.1 2905654 g115719 i0 73.5 2.23333333333333 68 18 75.6 0 234 31 1 68 KAL0020376.1 hypothetical protein WJX79_009890 [Trebouxia sp. C0005] diamond 603 102 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0005
30370473 30370473 PRJNA799842_P_NODE_85472_length_313_cov_0.962500_g83899_i0 PRJNA799842 85472 313 0.9625 3.012625 Chlorella desiccata (nom. nud.) 1650286 Plants Plants 96.3 7.68e-21   NR KAG7673517.1 1650286 g83899 i0 49 2.95207667731629 104 49 97.8 2 6 311 43 144 KAG7673517.1 hypothetical protein KSW81_006722 [Chlorella desiccata (nom. nud.)] diamond 924 96.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris Nannochloris sp. 'desiccata'
30938879 30938879 PRJNA799842_P_NODE_57174_length_376_cov_1.016502_g55601_i0 PRJNA799842 57174 376 1.016502 3.82204752 Auxenochlorella protothecoides 3075 Plants Plants 45.4 0.0182   NR RMZ53626.1 3075 g55601 i0 32.1 1.29255319148936 81 49 61.4 3 122 352 472 550 RMZ53626.1 hypothetical protein APUTEX25_003160 [Auxenochlorella protothecoides] diamond 486 45.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
32235721 32235721 PRJNA799842_P_NODE_29558_length_536_cov_1.481641_g27998_i0 PRJNA799842 29558 536 1.481641 7.94159576 Pleodorina starrii 330485 Plants Plants 82.8 6.91e-16   NR GLC37514.1 330485 g27998 i0 35 0.766791044776119 137 87 75.6 1 103 507 76 212 GLC37514.1 hypothetical protein PLESTM_000597400 [Pleodorina starrii] diamond 411 82.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Pleodorina Pleodorina starrii
32267151 32267151 PRJNA799842_P_NODE_113878_length_274_cov_2.104478_g112305_i0 PRJNA799842 113878 274 2.104478 5.76626972 Chlamydomonas reinhardtii 3055 Plants Plants 42.4 0.0238   NR XP_042926764.1 3055 g112305 i0 34.1 0.930656934306569 85 51 87.6 1 29 268 23 107 XP_042926764.1 uncharacterized protein CHLRE_02g075000v5 [Chlamydomonas reinhardtii] diamond 255 42.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;