RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA799842", tax_clade = "Metamonada" and tax_superkingdom = "Eukaryota"

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tax_phylum 2

analysis 2

tax_superkingdom 1

  • Eukaryota · 5 ✖

tax_clade 1

  • Metamonada · 5 ✖

bioproject 1

  • PRJNA799842 · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
795761 795761 PRJNA799842_P_NODE_84361_length_314_cov_1.991701_g82788_i0 PRJNA799842 84361 314 1.991701 6.25394114 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 54.7 0.008   NTclustered gi|2794969715|ref|XM_067868327.1| 2049356 g82788 i0 92.308 0.235668789808917 39 1 12 2 272 308 4111 4149 Monocercomonoides exilis putative histone acetyltransferase MYST1 (MONOS_15449), partial mRNA blastn 74 54.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
29305023 29305023 PRJNA799842_P_NODE_48729_length_407_cov_1.317365_g47156_i0 PRJNA799842 48729 407 1.317365 5.36167555 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 177 5.959999999999999e-53   NR KAJ3423361.1 1746091 g47156 i0 62.7 8.91154791154791 134 50 98.8 0 405 4 43 176 KAJ3423361.1 proteasome subunit alpha type-1 [Anaeramoeba flamelloides] diamond 3627 177 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
29959238 29959238 PRJNA799842_P_NODE_32551_length_507_cov_1.209677_g30985_i0 PRJNA799842 32551 507 1.209677 6.13306239 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 122 3.55e-29   NR XP_067770985.1 135588 g30985 i0 39.3 4.88165680473373 163 91 95.3 4 503 21 254 410 XP_067770985.1 AGC family protein kinase [Histomonas meleagridis] diamond 2475 122 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
31042824 31042824 PRJNA799842_P_NODE_33515_length_498_cov_1.929412_g31946_i0 PRJNA799842 33515 498 1.929412 9.60847176 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 62 9.29e-8   NR KAJ3452097.1 1746091 g31946 i0 32.7 1.87349397590361 150 83 79.5 5 100 495 26 175 KAJ3452097.1 histone acetyltransferase type b catalytic subunit [Anaeramoeba flamelloides] diamond 933 62.4 0.993589743589744 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
32835171 32835171 PRJNA799842_P_NODE_87860_length_309_cov_1.292373_g86287_i0 PRJNA799842 87860 309 1.292373 3.99343257 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 109 1.48e-25   NR KAJ3442602.1 1746091 g86287 i0 52 0.951456310679612 98 46 94.2 1 17 307 4 101 KAJ3442602.1 thioredoxin-like protein [Anaeramoeba flamelloides] diamond 294 109 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;