RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA799842", tax_clade = "FCB group" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA799842 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27527919 27527919 PRJNA799842_P_NODE_160883_length_246_cov_0.890173_g159310_i0 PRJNA799842 160883 246 0.890173 2.18982558 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 81.6 4.56e-16   NR MFA6107305.1 2053570 g159310 i0 54.2 0.878048780487805 72 33 87.8 0 245 30 286 357 MFA6107305.1 efflux RND transporter periplasmic adaptor subunit [Candidatus Latescibacterota bacterium] diamond 216 81.6 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
28601598 28601598 PRJNA799842_P_NODE_181267_length_242_cov_0.911243_g179694_i0 PRJNA799842 181267 242 0.911243 2.20520806 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 47.8 6.21e-4   NR MBI4553194.1 2053570 g179694 i0 52.4 0.520661157024793 42 20 52.1 0 15 140 144 185 MBI4553194.1 hypothetical protein [Candidatus Latescibacterota bacterium] diamond 126 47.8 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
28917047 28917047 PRJNA799842_P_NODE_91348_length_303_cov_1.691304_g89775_i0 PRJNA799842 91348 303 1.691304 5.12465112 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 150 9.04e-44   NR MEE2659073.1 2053570 g89775 i0 70.3 6 101 29 99 1 2 301 37 137 MEE2659073.1 glucosamine-6-phosphate deaminase [Candidatus Latescibacterota bacterium] diamond 1818 150 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
30496517 30496517 PRJNA799842_P_NODE_190093_length_241_cov_0.916667_g188520_i0 PRJNA799842 190093 241 0.916667 2.20916747 Candidatus Latescibacter sp. 3015206 Bacteria Bacteria 115 6.74e-28   NR MDP2984613.1 3015206 g188520 i0 92.2 0.796680497925311 64 5 79.7 0 192 1 370 433 MDP2984613.1 bifunctional alpha,alpha-trehalose-phosphate synthase (UDP-forming)/trehalose-phosphatase [Candidatus Latescibacter sp.] diamond 192 115 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota       Candidatus Latescibacter Candidatus Latescibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;