RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA799842", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Rokuibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rokuibacteriota · 6 ✖

tax_clade 1

  • Bacteria candidate phyla · 6 ✖

bioproject 1

  • PRJNA799842 · 6 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4622110 4622110 PRJNA799842_P_NODE_156064_length_247_cov_0.885057_g154491_i0 PRJNA799842 156064 247 0.885057 2.18609079 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 153 5.2799999999999996e-42   NR RPH81906.1 2053607 g154491 i0 100 0.995951417004049 82 0 99.6 0 2 247 192 273 RPH81906.1 MAG: thiamine pyrophosphate-binding protein [Candidatus Rokuibacteriota bacterium] diamond 246 153 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
18644908 18644908 PRJNA799842_P_NODE_138435_length_251_cov_0.865169_g136862_i0 PRJNA799842 138435 251 0.865169 2.17157419 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 166 7.22e-51   NR PYN52769.1 2053607 g136862 i0 92.8 1.9840637450199201 83 6 99.2 0 2 250 2 84 PYN52769.1 MAG: hypothetical protein DMD94_21215 [Candidatus Rokuibacteriota bacterium] diamond 498 166 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
27780686 27780686 PRJNA799842_P_NODE_134964_length_251_cov_0.865169_g133391_i0 PRJNA799842 134964 251 0.865169 2.17157419 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 116 3.46e-30   NR PYO52937.1 2053607 g133391 i0 65.9 0.9800796812749 82 28 98 0 5 250 49 130 PYO52937.1 MAG: nucleoside-diphosphate-sugar pyrophosphorylase [Candidatus Rokuibacteriota bacterium] diamond 246 116 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
28705311 28705311 PRJNA799842_P_NODE_169487_length_245_cov_0.895349_g167914_i0 PRJNA799842 169487 245 0.895349 2.19360505 Pseudomonadati 3379134 Bacteria Bacteria 159 1.4699999999999999e-43   NR OLE00487.1 1805346 g167914 i0 91.4 11.9020408163265 81 7 99.2 0 244 2 265 345 OLE00487.1 MAG: hypothetical protein AUG80_02210 [Candidatus Rokubacteria bacterium 13_1_20CM_4_68_9] diamond 2916 160 0.99375 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokubacteria bacterium 13_1_20CM_4_68_9
31033803 31033803 PRJNA799842_P_NODE_185015_length_242_cov_0.911243_g183442_i0 PRJNA799842 185015 242 0.911243 2.20520806 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 130 9.85e-37   NR MBI3635063.1 2053607 g183442 i0 82.5 3.96694214876033 80 14 99.2 0 1 240 33 112 MBI3635063.1 TRAP transporter small permease [Candidatus Rokuibacteriota bacterium] diamond 960 130 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
31222851 31222851 PRJNA799842_P_NODE_146655_length_249_cov_0.875000_g145082_i0 PRJNA799842 146655 249 0.875 2.17875 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 88.2 2.81e-18   NR PYN24592.1 2053607 g145082 i0 92 2.40963855421687 50 4 60.2 0 244 95 366 415 PYN24592.1 MAG: RNA polymerase subunit sigma-24 [Candidatus Rokuibacteriota bacterium] diamond 600 88.2 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;