RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA799842", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 7 ✖

tax_clade 1

  • Apusozoa · 7 ✖

bioproject 1

  • PRJNA799842 · 7 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9723921 9723921 PRJNA799842_P_NODE_86208_length_311_cov_7.394958_g84635_i0 PRJNA799842 86208 311 7.394958 22.99831938 Singekia montserratensis 2925341 Root_unresolved Root_unresolved 171 7.69e-38   NTclustered gi|2206682174|gb|OM966647.1| 2925341 g84635 i0 81.25 73.2926045016077 224 30 69 11 1 216 1622 1403 Singekia montserratensis strain MONTSE19P8 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 22794 171 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Singekia Singekia montserratensis
27148421 27148421 PRJNA799842_P_NODE_33482_length_498_cov_3.887059_g31913_i0 PRJNA799842 33482 498 3.887059 19.35755382 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 85.9 7.13e-18   NR XP_013758370.1 461836 g31913 i0 39.6 0.837349397590361 139 77 81.3 4 485 81 6 141 XP_013758370.1 uncharacterized protein AMSG_04698 [Thecamonas trahens ATCC 50062] diamond 417 85.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28569899 28569899 PRJNA799842_P_NODE_85067_length_313_cov_1.604167_g83494_i0 PRJNA799842 85067 313 1.604167 5.02104271 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 60.5 3.7e-8   NR XP_013760900.1 461836 g83494 i0 32.4 1.00638977635783 105 63 93.9 3 311 18 102 205 XP_013760900.1 tetraspanin family protein [Thecamonas trahens ATCC 50062] diamond 315 60.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31033809 31033809 PRJNA799842_P_NODE_25115_length_589_cov_2.176357_g23571_i0 PRJNA799842 25115 589 2.176357 12.81874273 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 84.7 6.86e-17   NR XP_013753243.1 461836 g23571 i0 34 0.764006791171477 150 96 74.9 2 467 27 12 161 XP_013753243.1 uncharacterized protein AMSG_10809 [Thecamonas trahens ATCC 50062] diamond 450 84.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31476212 31476212 PRJNA799842_P_NODE_118156_length_269_cov_1.964286_g116583_i0 PRJNA799842 118156 269 1.964286 5.28392934 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 97.4 3.0600000000000003e-21   NR XP_013755941.1 461836 g116583 i0 53.9 2.0185873605948 89 39 99.3 1 1 267 352 438 XP_013755941.1 nc protein [Thecamonas trahens ATCC 50062] diamond 543 97.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31887237 31887237 PRJNA799842_P_NODE_139277_length_250_cov_1.734463_g137704_i0 PRJNA799842 139277 250 1.734463 4.3361575 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 103 3.2099999999999994e-24   NR XP_013758079.1 461836 g137704 i0 63.4 0.984 82 29 98.4 1 2 247 125 205 XP_013758079.1 uncharacterized protein AMSG_05004 [Thecamonas trahens ATCC 50062] diamond 246 103 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32592388 32592388 PRJNA799842_P_NODE_52639_length_391_cov_4.597484_g51066_i0 PRJNA799842 52639 391 4.597484 17.97616244 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 145 9.559999999999998e-42   NR XP_013756220.1 461836 g51066 i0 60.9 2.70076726342711 110 43 84.4 0 331 2 26 135 XP_013756220.1 peptidyl-prolyl cis-trans isomerase [Thecamonas trahens ATCC 50062] diamond 1056 145 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;