contig_metadata
10 rows where bioproject = "PRJNA799842", tax_clade = "Amoebozoa" and tax_phylum = "Tubulinea"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2070894 | 2070894 | PRJNA799842_P_NODE_52542_length_392_cov_1.184953_g50969_i0 | PRJNA799842 | 52542 | 392 | 1.184953 | 4.64501576 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 153 | 5.69e-42 | NR | AAD37351.1 | 5775 | g50969 | i0 | 72.6 | 1.81377551020408 | 106 | 27 | 79.6 | 1 | 3 | 314 | 108 | 213 | AAD37351.1 pepstatin-insensitive carboxyl proteinase 1, partial [Amoeba proteus] | diamond | 711 | 154 | 0.993506493506494 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Amoebidae | Amoeba | Amoeba proteus | ||
| 7173024 | 7173024 | PRJNA799842_P_NODE_35406_length_483_cov_1.675610_g33836_i0 | PRJNA799842 | 35406 | 483 | 1.67561 | 8.0931963 | Amoeba proteus | 5775 | Tubulinea | other_Eukaryota | 273 | 2.09e-88 | NR | AAP88974.1 | 5775 | g33836 | i0 | 87.9 | 0.925465838509317 | 149 | 18 | 92.5 | 0 | 481 | 35 | 242 | 390 | AAP88974.1 S-adenosylmethionine synthetase 2 [Amoeba proteus] | diamond | 447 | 273 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Amoebidae | Amoeba | Amoeba proteus | ||
| 16096940 | 16096940 | PRJNA799842_P_NODE_21633_length_644_cov_1.886165_g20115_i0 | PRJNA799842 | 21633 | 644 | 1.886165 | 12.1469026 | Copromyxa laresi | 1789826 | Tubulinea | other_Eukaryota | 542 | 3.12e-149 | NTclustered | gi|1042160945|dbj|LC102279.1| | 1789826 | g20115 | i0 | 98.371 | 3.91614906832298 | 307 | 5 | 48 | 0 | 337 | 643 | 1 | 307 | Copromyxa sp. MK-2016 gene for elongation factor 2 alpha, partial cds, strain: ZEB1 | blastn | 2522 | 542 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa laresi | ||
| 16097498 | 16097498 | PRJNA799842_P_NODE_4653_length_1403_cov_15.173684_g3955_i0 | PRJNA799842 | 4653 | 1403 | 15.173684 | 212.88678652 | Copromyxa protea | 931554 | Tubulinea | other_Eukaryota | 1574 | 0 | NTclustered | gi|508737347|dbj|AB766053.1| | 931554 | g3955 | i0 | 87.365 | 27.4041339985745 | 1393 | 150 | 98 | 16 | 11 | 1381 | 1389 | 1 | Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 | blastn | 38448 | 1574 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea | ||
| 17374310 | 17374310 | PRJNA799842_P_NODE_89534_length_306_cov_1.592275_g87961_i0 | PRJNA799842 | 89534 | 306 | 1.592275 | 4.8723615 | Copromyxa sp. PKD 2011 | 1215977 | Tubulinea | other_Eukaryota | 566 | 8.239999999999998e-157 | NTclustered | gi|399764167|gb|JQ271678.1| | 1215977 | g87961 | i0 | 100 | 62.6993464052288 | 306 | 0 | 100 | 0 | 1 | 306 | 955 | 650 | Copromyxa sp. PKD 2011 strain ZEB1 18S ribosomal RNA gene, partial sequence | blastn | 19186 | 566 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa sp. PKD 2011 | ||
| 21198133 | 21198133 | PRJNA799842_P_NODE_81077_length_320_cov_1.469636_g79504_i0 | PRJNA799842 | 81077 | 320 | 1.469636 | 4.7028352 | Amoeba proteus | 5775 | Tubulinea | other_Eukaryota | 168 | 1.93e-48 | NR | AAP88974.1 | 5775 | g79504 | i0 | 76.4 | 0.99375 | 106 | 25 | 99.4 | 0 | 320 | 3 | 147 | 252 | AAP88974.1 S-adenosylmethionine synthetase 2 [Amoeba proteus] | diamond | 318 | 168 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Amoebidae | Amoeba | Amoeba proteus | ||
| 22472078 | 22472078 | PRJNA799842_P_NODE_46278_length_418_cov_1.237681_g44705_i0 | PRJNA799842 | 46278 | 418 | 1.237681 | 5.17350658 | Hartmannella cantabrigiensis | 239731 | Tubulinea | other_Eukaryota | 662 | 0 | NTclustered | gi|33946358|gb|AY294158.1| | 239731 | g44705 | i0 | 95.215 | 93.822966507177 | 418 | 20 | 100 | 0 | 1 | 418 | 1132 | 715 | Hartmannella cantabrigiensis actin mRNA, complete cds | blastn | 39218 | 662 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Hartmannella | Hartmannella cantabrigiensis | ||
| 27148400 | 27148400 | PRJNA799842_P_NODE_162482_length_246_cov_0.890173_g160909_i0 | PRJNA799842 | 162482 | 246 | 0.890173 | 2.18982558 | Amoeba proteus | 5775 | Tubulinea | other_Eukaryota | 133 | 2.23e-36 | NR | AKN09689.1 | 5775 | g160909 | i0 | 72.8 | 0.98780487804878 | 81 | 22 | 98.8 | 0 | 245 | 3 | 152 | 232 | AKN09689.1 Tom20 [Amoeba proteus] | diamond | 243 | 133 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Amoebidae | Amoeba | Amoeba proteus | ||
| 27464961 | 27464961 | PRJNA799842_P_NODE_133543_length_252_cov_1.290503_g131970_i0 | PRJNA799842 | 133543 | 252 | 1.290503 | 3.25206756 | Copromyxa protea | 931554 | Tubulinea | other_Eukaryota | 132 | 3.54e-36 | NR | AKA62191.1 | 931554 | g131970 | i0 | 69.9 | 0.988095238095238 | 83 | 25 | 98.8 | 0 | 3 | 251 | 147 | 229 | AKA62191.1 putative rhodoquinone biosynthesis methyltransferase-like protein RQUA [Copromyxa protea] | diamond | 249 | 132 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea | ||
| 30812224 | 30812224 | PRJNA799842_P_NODE_123134_length_264_cov_0.963351_g121561_i0 | PRJNA799842 | 123134 | 264 | 0.963351 | 2.54324664 | Amoeba proteus | 5775 | Tubulinea | other_Eukaryota | 125 | 2.8399999999999997e-31 | NR | AKN09691.1 | 5775 | g121561 | i0 | 65.5 | 0.988636363636364 | 87 | 28 | 98.9 | 1 | 263 | 3 | 726 | 810 | AKN09691.1 Tom70 [Amoeba proteus] | diamond | 261 | 125 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Amoebidae | Amoeba | Amoeba proteus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;