RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

19 rows where bioproject = "PRJNA798905" and tax_phylum = "Microsporidia"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 19 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA798905 · 19 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5046175 5046175 PRJNA798905_S_NODE_12504_length_400_cov_4.241590_g12055_i0 PRJNA798905 12504 400 4.24159 16.96636 Heterosporis 157917 Fungi Fungi 551 3.0999999999999986e-152   NTclustered gi|448278452|gb|KC137548.1| 1289055 g12055 i0 91.542 33.51 402 30 100 3 1 400 3560 3161 Heterosporis sp. NBDP-2013a isolate MN/WAE small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13404 551 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Heterosporis Heterosporis sp. NBDP-2013a
11422083 11422083 PRJNA798905_S_NODE_29869_length_276_cov_5.512315_g29420_i0 PRJNA798905 29869 276 5.512315 15.213989400000001 Heterosporis 157917 Fungi Fungi 313 1.05e-80   NTclustered gi|27448231|gb|AF387331.1| 184033 g29420 i0 88.976 29.6376811594203 254 26 91 1 22 273 2047 2300 Heterosporis anguillarum small subunit ribosomal RNA gene, internal transcribed spacer, and large subunit ribosomal RNA gene, complete sequence blastn 8180 313 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Heterosporis Heterosporis anguillarum
21194943 21194943 PRJNA798905_S_NODE_6477_length_524_cov_19.064302_g6028_i0 PRJNA798905 6477 524 19.064302 99.89694248 Pseudoloma neurophilia 146866 Fungi Fungi 905 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g6028 i0 99.797 93.5362595419847 492 1 100 0 1 492 796 305 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 49013 905 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
21620306 21620306 PRJNA798905_S_NODE_28977_length_281_cov_1.451923_g28528_i0 PRJNA798905 28977 281 1.451923 4.07990363 Pleistophoridae 35232 Fungi Fungi 333 8.259999999999999e-87   NTclustered gi|134147422|gb|EF119339.1| 249366 g28528 i0 88.07 53.2526690391459 285 28 100 5 1 281 1968 1686 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 14964 333 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
25444839 25444839 PRJNA798905_S_NODE_16900_length_356_cov_6.180212_g16451_i0 PRJNA798905 16900 356 6.180212 22.00155472 Pseudoloma neurophilia 146866 Fungi Fungi 69.3 2.37e-11   NR KRH94204.1 146866 g16451 i0 43.3 1.60112359550562 104 48 80.9 3 336 49 124 224 KRH94204.1 hypothetical protein M153_340000906 [Pseudoloma neurophilia] diamond 570 69.3 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
27211816 27211816 PRJNA798905_S_NODE_17782_length_349_cov_4.557971_g17333_i0 PRJNA798905 17782 349 4.557971 15.90731879 Pseudoloma neurophilia 146866 Fungi Fungi 152 2e-43   NR KRH93469.1 146866 g17333 i0 85.1 0.808022922636103 94 14 80.8 0 347 66 147 240 KRH93469.1 hypothetical protein M153_8510002738 [Pseudoloma neurophilia] diamond 282 152 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
27306972 27306972 PRJNA798905_S_NODE_19683_length_334_cov_8.111111_g19234_i0 PRJNA798905 19683 334 8.111111 27.09111074 Pseudoloma neurophilia 146866 Fungi Fungi 136 6.15e-36   NR KRH92462.1 146866 g19234 i0 98.5 0.592814371257485 66 1 59.3 0 198 1 93 158 KRH92462.1 hypothetical protein M153_57350001210 [Pseudoloma neurophilia] diamond 198 136 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
27338566 27338566 PRJNA798905_S_NODE_17163_length_354_cov_5.124555_g16714_i0 PRJNA798905 17163 354 5.124555 18.1409247 Pseudoloma neurophilia 146866 Fungi Fungi 221 4.31e-69   NR KRH94915.1 146866 g16714 i0 99.1 0.915254237288136 108 1 91.5 0 8 331 270 377 KRH94915.1 hypothetical protein M153_11200021404 [Pseudoloma neurophilia] diamond 324 221 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
27843519 27843519 PRJNA798905_S_NODE_3744_length_690_cov_3.019449_g3313_i0 PRJNA798905 3744 690 3.019449 20.8341981 Pseudoloma neurophilia 146866 Fungi Fungi 398 2.1199999999999998e-136   NR KRH92462.1 146866 g3313 i0 95.7 0.9 207 9 90 0 688 68 158 364 KRH92462.1 hypothetical protein M153_57350001210 [Pseudoloma neurophilia] diamond 621 398 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
27906559 27906559 PRJNA798905_S_NODE_34125_length_257_cov_2.510870_g33676_i0 PRJNA798905 34125 257 2.51087 6.4529359 Pseudoloma neurophilia 146866 Fungi Fungi 153 1.11e-44   NR KRH94683.1 146866 g33676 i0 100 0.992217898832685 85 0 99.2 0 255 1 74 158 KRH94683.1 hypothetical protein M153_1650005536 [Pseudoloma neurophilia] diamond 255 153 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
28222391 28222391 PRJNA798905_S_NODE_32586_length_264_cov_1.382199_g32137_i0 PRJNA798905 32586 264 1.382199 3.64900536 Pseudoloma neurophilia 146866 Fungi Fungi 149 2.9199999999999995e-43   NR KRH93927.1 146866 g32137 i0 90.8 0.863636363636364 76 3 81.8 1 216 1 26 101 KRH93927.1 hypothetical protein M153_485000642 [Pseudoloma neurophilia] diamond 228 149 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
28696355 28696355 PRJNA798905_S_NODE_35807_length_251_cov_1.292135_g35358_i0 PRJNA798905 35807 251 1.292135 3.24325885 Pseudoloma neurophilia 146866 Fungi Fungi 79 1.38e-15   NR KRH93076.1 146866 g35358 i0 48.1 0.944223107569721 79 41 94.4 0 2 238 133 211 KRH93076.1 hypothetical protein M153_156700021, partial [Pseudoloma neurophilia] diamond 237 79 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
28696357 28696357 PRJNA798905_S_NODE_42367_length_229_cov_2.032051_g41918_i0 PRJNA798905 42367 229 2.032051 4.65339679 Pseudoloma neurophilia 146866 Fungi Fungi 157 5.92e-47   NR KRH93443.1 146866 g41918 i0 92.1 0.995633187772926 76 6 99.6 0 1 228 73 148 KRH93443.1 Polyadenylation factor I complex, subunit, Yth1 (CPSF subunit) [Pseudoloma neurophilia] diamond 228 157 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
28948995 28948995 PRJNA798905_S_NODE_16628_length_359_cov_1.793706_g16179_i0 PRJNA798905 16628 359 1.793706 6.43940454 Pseudoloma neurophilia 146866 Fungi Fungi 132 1.02e-35   NR KRH92856.1 146866 g16179 i0 95.4 0.543175487465181 65 3 54.3 0 213 19 162 226 KRH92856.1 hypothetical protein M153_24140001108 [Pseudoloma neurophilia] diamond 195 132 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
29043673 29043673 PRJNA798905_S_NODE_33268_length_261_cov_2.047872_g32819_i0 PRJNA798905 33268 261 2.047872 5.34494592 Pseudoloma neurophilia 146866 Fungi Fungi 198 9.51e-63   NR KRH93927.1 146866 g32819 i0 100 0.988505747126437 86 0 98.9 0 260 3 98 183 KRH93927.1 hypothetical protein M153_485000642 [Pseudoloma neurophilia] diamond 258 198 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
29138458 29138458 PRJNA798905_S_NODE_21989_length_319_cov_7.589431_g21540_i0 PRJNA798905 21989 319 7.589431 24.21028489 Pseudoloma neurophilia 146866 Fungi Fungi 222 1.8499999999999999e-69   NR KRH94915.1 146866 g21540 i0 100 0.987460815047022 105 0 98.7 0 3 317 160 264 KRH94915.1 hypothetical protein M153_11200021404 [Pseudoloma neurophilia] diamond 315 222 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
30307256 30307256 PRJNA798905_S_NODE_39752_length_241_cov_2.291667_g39303_i0 PRJNA798905 39752 241 2.291667 5.52291747 Pseudoloma neurophilia 146866 Fungi Fungi 61.6 5.52e-9   NR KRH94238.1 146866 g39303 i0 96.3 0.336099585062241 27 1 33.6 0 240 160 250 276 KRH94238.1 hypothetical protein M153_3250008583 [Pseudoloma neurophilia] diamond 81 61.6 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
31887207 31887207 PRJNA798905_S_NODE_24537_length_304_cov_3.393939_g24088_i0 PRJNA798905 24537 304 3.393939 10.31757456 Dictyocoela muelleri 279532 Fungi Fungi 48.1 7.36e-4   NR KAG0441725.1 279532 g24088 i0 30.4 1.00657894736842 102 69 98.7 1 304 5 120 221 KAG0441725.1 Ran-specific GTPase-activating protein 1 [Dictyocoela muelleri] diamond 306 48.1 1 Eukaryota Opisthokonta Fungi Microsporidia       Dictyocoela Dictyocoela muelleri
32235656 32235656 PRJNA798905_S_NODE_35398_length_252_cov_2.581006_g34949_i0 PRJNA798905 35398 252 2.581006 6.50413512 Pseudoloma neurophilia 146866 Fungi Fungi 134 1.21e-37   NR KRH94122.1 146866 g34949 i0 100 0.797619047619048 67 0 79.8 0 252 52 113 179 KRH94122.1 Membrane protein involved in ER to Golgi transport [Pseudoloma neurophilia] diamond 201 134 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;