RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA798905" and tax_kingdom = "Promethearchaeati"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Promethearchaeati · 2 ✖

bioproject 1

  • PRJNA798905 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26927408 26927408 PRJNA798905_S_NODE_38402_length_244_cov_4.157895_g37953_i0 PRJNA798905 38402 244 4.157895 10.1452638 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 57.8 4.93e-9   NR TFG97008.1 2053491 g37953 i0 41.9 0.762295081967213 62 36 76.2 0 48 233 1 62 TFG97008.1 MAG: hypothetical protein E4H12_09715 [Candidatus Thorarchaeota archaeon] diamond 186 57.8 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon
31792155 31792155 PRJNA798905_S_NODE_43557_length_219_cov_4.150685_g43108_i0 PRJNA798905 43557 219 4.150685 9.09000015 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 46.2 0.00164   NR TFG99955.1 2053491 g43108 i0 42.9 1.28767123287671 63 30 86.3 2 13 201 374 430 TFG99955.1 MAG: hypothetical protein E4H12_00765 [Candidatus Thorarchaeota archaeon] diamond 282 46.2 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;