RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA798905", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA798905 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28569820 28569820 PRJNA798905_S_NODE_9647_length_442_cov_4.476965_g9198_i0 PRJNA798905 9647 442 4.476965 19.7881853 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 108 1.5600000000000002e-26   NR AAX25032.2 6182 g9198 i0 91.1 0.380090497737557 56 5 38 0 286 119 113 168 AAX25032.2 SJCHGC04714 protein, partial [Schistosoma japonicum] diamond 168 108 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
31602724 31602724 PRJNA798905_S_NODE_26856_length_291_cov_18.766055_g26407_i0 PRJNA798905 26856 291 18.766055 54.60922005 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 79.3 1.7e-16   NR AAW27122.1 6182 g26407 i0 83.7 0.505154639175258 49 5 47.4 1 257 120 1 49 AAW27122.1 SJCHGC01951 protein [Schistosoma japonicum] diamond 147 79.3 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;