RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA798905", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA798905 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30338779 30338779 PRJNA798905_S_NODE_9092_length_452_cov_9.205805_g8643_i0 PRJNA798905 9092 452 9.205805 41.6102386 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 218 1.98e-67   NR MFH1190873.1 2035772 g8643 i0 68 0.995575221238938 150 47 99.6 1 3 452 178 326 MFH1190873.1 FAD:protein FMN transferase [Candidatus Omnitrophota bacterium] diamond 450 218 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31823845 31823845 PRJNA798905_S_NODE_26017_length_296_cov_2.547085_g25568_i0 PRJNA798905 26017 296 2.547085 7.5393716 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 62.8 2.67e-10   NR MFH1858557.1 2035772 g25568 i0 41.1 0.962837837837838 95 47 96.3 4 295 11 7 92 MFH1858557.1 7-cyano-7-deazaguanine synthase [Candidatus Omnitrophota bacterium] diamond 285 62.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;