RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA798905", tax_clade = "Opisthokonta" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA798905 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2067896 2067896 PRJNA798905_S_NODE_29462_length_278_cov_5.453659_g29013_i0 PRJNA798905 29462 278 5.453659 15.16117202 Malassezia restricta 76775 Fungi Fungi 409 1.32e-109   NTclustered gi|1546632392|ref|XM_027627856.1| 76775 g29013 i0 100 0.794964028776978 221 0 79 0 1 221 401 621 Malassezia restricta 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (MRET_1229), partial mRNA blastn 221 409 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
3342941 3342941 PRJNA798905_S_NODE_22363_length_317_cov_3.237705_g21914_i0 PRJNA798905 22363 317 3.237705 10.26352485 Malassezia globosa 76773 Fungi Fungi 363 1.2099999999999999e-95   NTclustered gi|164655882|ref|XM_001729018.1| 425265 g21914 i0 97.664 11.7192429022082 214 0 99 5 105 315 446 657 Malassezia globosa CBS 7966 uncharacterized protein (MGL_3858), partial mRNA blastn 3715 363 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
21620453 21620453 PRJNA798905_S_NODE_44757_length_202_cov_4.759690_g44308_i0 PRJNA798905 44757 202 4.75969 9.6145738 Filobasidiales 90886 Fungi Fungi 374 3.3e-99   NTclustered gi|1503120239|ref|NG_062135.1| 5211 g44308 i0 100 100 202 0 100 0 1 202 944 743 Piskurozyma capsuligena JCM 2273 18S rRNA gene, partial sequence; from TYPE material blastn 20200 374 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Filobasidiales Piskurozymaceae Piskurozyma Piskurozyma capsuligena

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;