RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA798905", tax_clade = "FCB group" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA798905 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27211819 27211819 PRJNA798905_S_NODE_2382_length_882_cov_6.817058_g1135_i2 PRJNA798905 2382 882 6.817058 60.12645156 Balneolaceae bacterium 2053516 Bacteria Bacteria 70.9 1.49e-9   NR MFA5670203.1 2053516 g1135 i2 41.9 0.316326530612245 93 52 31 2 874 602 375 467 MFA5670203.1 DUF5661 family protein [Balneolaceae bacterium] diamond 279 70.9 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium
28159641 28159641 PRJNA798905_S_NODE_8725_length_460_cov_14.167959_g8276_i0 PRJNA798905 8725 460 14.167959 65.1726114 Balneolaceae bacterium 2053516 Bacteria Bacteria 95.5 5.71e-20   NR MFA5669454.1 2053516 g8276 i0 36 0.88695652173913 136 82 86.1 3 44 439 225 359 MFA5669454.1 hypothetical protein [Balneolaceae bacterium] diamond 408 95.5 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium
31159430 31159430 PRJNA798905_S_NODE_17195_length_354_cov_3.074733_g16746_i0 PRJNA798905 17195 354 3.074733 10.88455482 Balneolaceae bacterium 2053516 Bacteria Bacteria 61.2 1.77e-8   NR MFA5669439.1 2053516 g16746 i0 34.7 0.855932203389831 101 66 85.6 0 36 338 77 177 MFA5669439.1 hypothetical protein [Balneolaceae bacterium] diamond 303 61.2 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;