RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA798905" and tax_clade = "Candidatus Pacearchaeota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Candidatus Pacearchaeota · 4 ✖

bioproject 1

  • PRJNA798905 · 4 ✖

analysis 1

tax_phylum 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26999556 26999556 PRJNA798905_S_NODE_20642_length_328_cov_4.121569_g20193_i0 PRJNA798905 20642 328 4.121569 13.51874632 root 1 Root_unresolved Root_unresolved 57.8 1.6e-7   NR MFA5071309.1 2026773 g20193 i0 47.7 1.6280487804878 88 41 78.7 3 9 266 78 162 MFA5071309.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 534 58.2 0.993127147766323 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
28064682 28064682 PRJNA798905_S_NODE_26045_length_296_cov_2.035874_g25596_i0 PRJNA798905 26045 296 2.035874 6.02618704 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 56.6 9.07e-7   NR MFA5071262.1 2026773 g25596 i0 40 0.608108108108108 60 36 60.8 0 182 3 7 66 MFA5071262.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 180 56.6 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
30243665 30243665 PRJNA798905_S_NODE_29872_length_276_cov_5.325123_g29423_i0 PRJNA798905 29872 276 5.325123 14.69733948 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 76.3 1.07e-14   NR MBI2004439.1 2026773 g29423 i0 79.6 0.532608695652174 49 10 53.3 0 194 48 20 68 MBI2004439.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 147 76.3 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
31855570 31855570 PRJNA798905_S_NODE_24517_length_304_cov_4.090909_g24068_i0 PRJNA798905 24517 304 4.090909 12.43636336 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 84.7 3.96e-18   NR MFA5071271.1 2026773 g24068 i0 36.7 2.91118421052632 98 61 96.7 1 296 3 20 116 MFA5071271.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 885 84.7 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;