RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA798905", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA798905 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27812336 27812336 PRJNA798905_S_NODE_26444_length_294_cov_1.647059_g25995_i0 PRJNA798905 26444 294 1.647059 4.84235346 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 67.4 7e-11   NR MDN5274245.1 2026720 g25995 i0 73.7 0.387755102040816 38 10 38.8 0 181 294 1 38 MDN5274245.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 114 67.4 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
31001932 31001932 PRJNA798905_S_NODE_26754_length_292_cov_3.164384_g26305_i0 PRJNA798905 26754 292 3.164384 9.24000128 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 137 8.3e-38   NR MDN5274245.1 2026720 g26305 i0 66 0.996575342465753 97 33 99.7 0 2 292 32 128 MDN5274245.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 291 137 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
31191067 31191067 PRJNA798905_S_NODE_35335_length_252_cov_3.871508_g34886_i0 PRJNA798905 35335 252 3.871508 9.75620016 Candidatus Saccharimonadaceae bacterium 2830836 Bacteria Bacteria 62 6.01e-9   NR MBS7346620.1 2830836 g34886 i0 48.7 0.928571428571429 78 35 91.7 2 234 4 90 163 MBS7346620.1 hypothetical protein [Candidatus Saccharimonadaceae bacterium] diamond 234 62 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae   Candidatus Saccharimonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;